RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 SCOCQ9UIL1 159 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 KCNE2Q9Y6J6 123 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 MYO9BQ13459 2157 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 DHRS12A0PJE2 317 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 ARPC2O15144 300 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 PRAMEF4O60810 478 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 POP7O75817 140 aaKnown RBP8.86□□□□□ -0.99
PDPN-201ENST00000294489 IGLV3-19P01714 112 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 DNTTP04053 509 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 HTR1EP28566 365 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 IMPA1P29218 277 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 HSPA13P48723 471 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 CSTF3Q12996 717 aaKnown RBP8.86□□□□□ -0.99
PDPN-201ENST00000294489 EOGTQ5NDL2 527 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 PRAMEF9Q5VWM5 478 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 SUSD1Q6UWL2 747 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 TRIM69Q86WT6 500 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 HORMAD1Q86X24 394 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 PROSER1Q86XN7 944 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 OR8J3Q8NGG0 315 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 CANT1Q8WVQ1 401 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 ERLEC1Q96DZ1 483 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 TMEM74Q96NL1 305 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 GAS2L1Q99501 681 aaPredicted RBP8.86□□□□□ -0.99
PDPN-201ENST00000294489 TRIM8Q9BZR9 551 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 RMI1Q9H9A7 625 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 PRM3Q9NNZ6 103 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 CCM2LQ9NUG4 571 aaPredicted RBP8.86□□□□□ -0.99
PDPN-201ENST00000294489 MMP17Q9ULZ9 603 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 AURKCQ9UQB9 309 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 SLC17A4Q9Y2C5 497 aa8.86□□□□□ -0.99
PDPN-201ENST00000294489 EIF4E1BA6NMX2 242 aaKnown RBP8.85□□□□□ -0.99
PDPN-201ENST00000294489 TXNDC9O14530 226 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 RNGTTO60942 597 aaKnown RBP8.85□□□□□ -0.99
PDPN-201ENST00000294489 PCCBP05166 539 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 ERGP11308 486 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 SRFP11831 508 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 MYCLP1P12525 358 aaPredicted RBP8.85□□□□□ -0.99
PDPN-201ENST00000294489 ACPPP15309 386 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 CLDN8P56748 225 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 CCSMST1Q4G0I0 132 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 SLC44A4Q53GD3 710 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 SPANXN4Q5MJ08 99 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 METRNLQ641Q3 311 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 CAPN13Q6MZZ7 669 aaPredicted RBP8.85□□□□□ -0.99
PDPN-201ENST00000294489 TMEM154Q6P9G4 183 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 FAM83HQ6ZRV2 1179 aaPredicted RBP8.85□□□□□ -0.99
PDPN-201ENST00000294489 SYTL1Q8IYJ3 562 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 DNAJB8Q8NHS0 232 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 LRTOMTQ8WZ04 291 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 FOXJ1Q92949 421 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 SLCO4A1Q96BD0 722 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 WDR34Q96EX3 536 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 MRGPRX1Q96LB2 322 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 OR52E6Q96RD3 313 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 SH3GL1Q99961 368 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 SLC17A9Q9BYT1 436 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 ZDHHC5Q9C0B5 715 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 CNOT11Q9UKZ1 510 aaKnown RBP8.85□□□□□ -0.99
PDPN-201ENST00000294489 SPTBN5Q9NRC6 3674 aaKnown RBP8.85□□□□□ -0.99
PDPN-201ENST00000294489 E7EQ34 232 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 HNRNPRO43390 633 aaKnown RBP8.85□□□□□ -0.99
PDPN-201ENST00000294489 AKAP10O43572 662 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 NARSO43776 548 aaKnown RBP8.85□□□□□ -0.99
PDPN-201ENST00000294489 KCNJ13O60928 360 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 GMNNO75496 209 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 PCDH8O95206 1070 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 CAPNS1P04632 268 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 GPIP06744 558 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 YBX1P67809 324 aaKnown RBP8.85□□□□□ -0.99
PDPN-201ENST00000294489 DOC2AQ14183 400 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 LEXMQ3ZCV2 418 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 TBCELQ5QJ74 424 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 GRHL2Q6ISB3 625 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 CRTC3Q6UUV7 619 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 TMEM92Q6UXU6 159 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 PDZD3Q86UT5 571 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 LRRTM4Q86VH4 590 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 KRTCAP2Q8N6L1 136 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 CLHC1Q8NHS4 586 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 GATA6Q92908 595 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 UHRF1Q96T88 793 aaPredicted RBP8.85□□□□□ -0.99
PDPN-201ENST00000294489 SGPP1Q9BX95 441 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 SLC6A17Q9H1V8 727 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 CHRDQ9H2X0 955 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 RMND5AQ9H871 391 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 GPRC5BQ9NZH0 403 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 VPS29Q9UBQ0 182 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 CIDEBQ9UHD4 219 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 COLQQ9Y215 455 aaPredicted RBP8.85□□□□□ -0.99
PDPN-201ENST00000294489 AP3M1Q9Y2T2 418 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 PCDHGA11Q9Y5H2 935 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 A0A1W2PQU0 124 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 H0YIV9 168 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 KMOO15229 486 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 UMPSP11172 480 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 HSD3B1P14060 373 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 AMD1P17707 334 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 HSD3B2P26439 372 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 S100A3P33764 101 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms