RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 RHBDL3P58872 404 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 SMYD5Q6GMV2 418 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 OXR1Q8N573 874 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 ADAD1Q96M93 576 aaKnown RBP15.78■□□□□ 0.12
SSRP1-202ENST00000293880 C12orf66Q96MD2 445 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 PKP2Q99959 881 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 SRMSQ9H3Y6 488 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 HSPB11Q9Y547 144 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 GRXCR1A8MXD5 290 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 MATN3O15232 486 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 CDRT1O95170 752 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 SIX3O95343 332 aaPredicted RBP15.78■□□□□ 0.12
SSRP1-202ENST00000293880 YES1P07947 543 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 GRIA1P42261 906 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 ZDHHC20Q5W0Z9 365 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 METTL3Q86U44 580 aaKnown RBP15.78■□□□□ 0.12
SSRP1-202ENST00000293880 ELMOD2Q8IZ81 293 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 PHTF2Q8N3S3 785 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 YIPF7Q8N8F6 280 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 ZNF226Q9NYT6 803 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 CMAHPQ9Y471 501 aa15.78■□□□□ 0.12
SSRP1-202ENST00000293880 DGKQP52824 942 aa15.77■□□□□ 0.12
SSRP1-202ENST00000293880 PRR5P85299 388 aa15.77■□□□□ 0.12
SSRP1-202ENST00000293880 RHEBQ15382 184 aa15.77■□□□□ 0.12
SSRP1-202ENST00000293880 PDCD4Q53EL6 469 aaKnown RBP15.77■□□□□ 0.12
SSRP1-202ENST00000293880 INTS6LQ5JSJ4 861 aaKnown RBP15.77■□□□□ 0.12
SSRP1-202ENST00000293880 RGMBQ6NW40 437 aa15.77■□□□□ 0.12
SSRP1-202ENST00000293880 HSD17B14Q9BPX1 270 aa15.77■□□□□ 0.12
SSRP1-202ENST00000293880 RIC1Q4ADV7 1423 aa15.77■□□□□ 0.12
SSRP1-202ENST00000293880 PCDH7O60245 1069 aa15.77■□□□□ 0.12
SSRP1-202ENST00000293880 GBAP04062 536 aa15.77■□□□□ 0.12
SSRP1-202ENST00000293880 HSD11B1P28845 292 aa15.77■□□□□ 0.12
SSRP1-202ENST00000293880 ARL9Q6T311 187 aa15.77■□□□□ 0.12
SSRP1-202ENST00000293880 POGLUT1Q8NBL1 392 aa15.77■□□□□ 0.12
SSRP1-202ENST00000293880 RAB2BQ8WUD1 216 aa15.77■□□□□ 0.12
SSRP1-202ENST00000293880 GPR20Q99678 358 aa15.77■□□□□ 0.12
SSRP1-202ENST00000293880 C7orf50Q9BRJ6 194 aaKnown RBP15.77■□□□□ 0.12
SSRP1-202ENST00000293880 CENPMQ9NSP4 180 aa15.77■□□□□ 0.12
SSRP1-202ENST00000293880 C1orf109Q9NX04 203 aa15.77■□□□□ 0.12
SSRP1-202ENST00000293880 SPATA31D1Q6ZQQ2 1576 aa15.77■□□□□ 0.12
SSRP1-202ENST00000293880 ASGR1P07306 291 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 TIE1P35590 1138 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 NR0B1P51843 470 aaKnown RBP15.77■□□□□ 0.11
SSRP1-202ENST00000293880 MEP1AQ16819 746 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 AMZ1Q400G9 498 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 TPRG1LQ5T0D9 272 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 IRF2BP1Q8IU81 584 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 TLCD1Q96CP7 247 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 HMGXB4Q9UGU5 601 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 LGALS13Q9UHV8 139 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 SLC31A1O15431 190 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 CDH1P12830 882 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 ELK4P28324 431 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 GPALPP1Q8IXQ4 340 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 VGLL2Q8N8G2 317 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 RASGEF1AQ8N9B8 481 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 ZDHHC2Q9UIJ5 367 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 NPHS1O60500 1241 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 SULT2A1Q06520 285 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 SLC10A7Q0GE19 358 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 RFTN2Q52LD8 501 aaPredicted RBP15.77■□□□□ 0.11
SSRP1-202ENST00000293880 KLHL22Q53GT1 634 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 OR4F3Q6IEY1 312 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 ITPAQ9BY32 194 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 SLC39A1Q9NY26 324 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 COPS7AQ9UBW8 275 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 ST14Q9Y5Y6 855 aa15.77■□□□□ 0.11
SSRP1-202ENST00000293880 SLC35G6P0C7Q6 338 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 ZNF3P17036 446 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 HEPACAMQ14CZ8 416 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 HERC3Q15034 1050 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 ZMYND11Q15326 602 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 VTCN1Q7Z7D3 282 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 SDR16C5Q8N3Y7 309 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 LRRC57Q8N9N7 239 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 PPTC7Q8NI37 304 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 OR52B2Q96RD2 323 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 DHX33Q9H6R0 707 aaKnown RBP15.76■□□□□ 0.11
SSRP1-202ENST00000293880 GDAP2Q9NXN4 497 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 KLK1P06870 262 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 CSKP41240 450 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 PIGFQ07326 219 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 ATAT1Q5SQI0 421 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 SSX6Q7RTT6 188 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 RBM18Q96H35 190 aaKnown RBP15.76■□□□□ 0.11
SSRP1-202ENST00000293880 KCTD7Q96MP8 289 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.76■□□□□ 0.11
SSRP1-202ENST00000293880 APOBEC3GQ9HC16 384 aaKnown RBP15.76■□□□□ 0.11
SSRP1-202ENST00000293880 MEMO1Q9Y316 297 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 RHPN2P1A8MT19 583 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 C8orf89P0DMQ9 161 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 HSD3B1P14060 373 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 GBX2P52951 348 aaPredicted RBP15.76■□□□□ 0.11
SSRP1-202ENST00000293880 C1QTNF8P60827 252 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 ZNF517Q6ZMY9 492 aaPredicted RBP15.76■□□□□ 0.11
SSRP1-202ENST00000293880 BEND4Q6ZU67 534 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 C1orf127Q8N9H9 656 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 AKTIPQ9H8T0 292 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 GLUD2P49448 558 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 HSDL1Q3SXM5 330 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms