RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 NEMP2A6NFY4 417 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 INMTO95050 263 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 SCELO95171 688 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 RLN1P04808 185 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 CCNYL3P0C7X3 344 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 MYBPC1Q00872 1141 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 IRF8Q02556 426 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 SLC13A2Q13183 592 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 ZNF460Q14592 562 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 OGFRL1Q5TC84 451 aaPredicted RBP11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 GPR153Q6NV75 609 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 ESRP1Q6NXG1 681 aaKnown RBP11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 CXXC5Q7LFL8 322 aaKnown RBP11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 RABEPKQ7Z6M1 372 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 ZNF598Q86UK7 904 aaKnown RBP11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 RAVER1Q8IY67 606 aaKnown RBP11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 DENND1AQ8TEH3 1009 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 ANKRD49Q8WVL7 239 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 MYLIPQ8WY64 445 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 C1orf74Q96LT6 269 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 WRAP53Q9BUR4 548 aaKnown RBP11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 TMLHEQ9NVH6 421 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 CNTN6Q9UQ52 1028 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 COLEC10Q9Y6Z7 277 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 ARPC4-TTLL3A0A0A6YYG9 625 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 SOBPA7XYQ1 873 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 RHPN2P1A8MT19 583 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 PIP5K1BO14986 540 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 XPNPEP2O43895 674 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 NPHS1O60500 1241 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 ZNF217O75362 1048 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 PIRTP0C851 137 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 ATP6V0D1P61421 351 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 FAM171BQ6P995 826 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 DET1Q7L5Y6 550 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 ANKRD13BQ86YJ7 626 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 ZDHHC21Q8IVQ6 265 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 OR2AP1Q8NGE2 309 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 BRSK1Q8TDC3 778 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 CYB5D2Q8WUJ1 264 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 HBEGFQ99075 208 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 CLSTN3Q9BQT9 956 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 PBX4Q9BYU1 374 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 SUV39H2Q9H5I1 410 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 UBE2ZQ9H832 354 aaPredicted RBP11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 ELOVL2Q9NXB9 296 aa11.11□□□□□ -0.63
NPC1L1-201ENST00000289547 QSER1Q2KHR3 1735 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 TCRBV21S2A2A0A5A6 115 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 hCG_2039718K7EN88 272 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 ZNF24P17028 368 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 EPGNQ6UW88 154 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 OR52J3Q8NH60 311 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 PTCD2Q8WV60 388 aaKnown RBP11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 UBE2E3Q969T4 207 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 ERMAPQ96PL5 475 aaPredicted RBP11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 SLC38A2Q96QD8 506 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 FERD3LQ96RJ6 166 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 MNTQ99583 582 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 SOX17Q9H6I2 414 aaPredicted RBP11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 USP29Q9HBJ7 922 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 PCDH10Q9P2E7 1040 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 GON4LQ3T8J9 2241 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 SLC28A1O00337 649 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 SLC30A4O14863 429 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 FAM189A1O60320 539 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 GCATO75600 419 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 MYOGP15173 224 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 MC4RP32245 332 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 DPP6P42658 865 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 ERVFC1P60507 584 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 IRF9Q00978 393 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 MAB21L1Q13394 359 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 HECTD2Q5U5R9 776 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 CCSAPQ6IQ19 270 aaPredicted RBP11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 TXNDC11Q6PKC3 985 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 DEF8Q6ZN54 512 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 OR5K1Q8NHB7 308 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 TTYH2Q9BSA4 534 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 BEX2Q9BXY8 128 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 SIRPGQ9P1W8 387 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 MKLN1Q9UL63 735 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 CSF2P04141 144 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 FABP3P05413 133 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 SRPRAP08240 638 aaKnown RBP11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 PRG2P13727 222 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 MAT2AP31153 395 aaKnown RBP11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 GARNL3Q5VVW2 1013 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 CCBE1Q6UXH8 406 aaPredicted RBP11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 C15orf39Q6ZRI6 1047 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 KRT77Q7Z794 578 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 OR4L1Q8NH43 312 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 TRMT2BQ96GJ1 504 aaKnown RBP11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 CHIAQ9BZP6 476 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 GBA3Q9H227 469 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 PIGVQ9NUD9 493 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 SNX6Q9UNH7 406 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 TMEM233B4DJY2 109 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 TNFRSF11BO00300 401 aa11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 GTF2E2P29084 291 aaKnown RBP11.1□□□□□ -0.63
NPC1L1-201ENST00000289547 VIPR2P41587 438 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms