RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 NFE2L1Q14494 772 aa18.68■□□□□ 0.58
BRAF-201ENST00000288602 ZNF658BQ4V348 819 aaPredicted RBP18.68■□□□□ 0.58
BRAF-201ENST00000288602 DOK6Q6PKX4 331 aa18.68■□□□□ 0.58
BRAF-201ENST00000288602 XKR5Q6UX68 686 aa18.68■□□□□ 0.58
BRAF-201ENST00000288602 SYTL1Q8IYJ3 562 aa18.68■□□□□ 0.58
BRAF-201ENST00000288602 ZNF480Q8WV37 535 aa18.68■□□□□ 0.58
BRAF-201ENST00000288602 SUSD6Q92537 303 aa18.68■□□□□ 0.58
BRAF-201ENST00000288602 OR6B1O95007 311 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 CLIC3O95833 236 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 ANXA6P08133 673 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 UMPSP11172 480 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 PRPH2P23942 346 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 P2RY2P41231 377 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 CNTN1Q12860 1018 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 STARD3Q14849 445 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 ATP6AP1Q15904 470 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 CATSPEREQ5SY80 951 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 ERN2Q76MJ5 926 aaKnown RBP18.67■□□□□ 0.58
BRAF-201ENST00000288602 PAPD5Q8NDF8 572 aaKnown RBP18.67■□□□□ 0.58
BRAF-201ENST00000288602 NRTNQ99748 197 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 VPS29Q9UBQ0 182 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 ADGRE2Q9UHX3 823 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 MUC22E2RYF6 1773 aaPredicted RBP18.67■□□□□ 0.58
BRAF-201ENST00000288602 EPOPA6NHQ4 379 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 TNFAIP8O95379 198 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 MYCLP1P12525 358 aaPredicted RBP18.67■□□□□ 0.58
BRAF-201ENST00000288602 GJA4P35212 333 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 SLC14A1Q13336 389 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 INTS11Q5TA45 600 aaKnown RBP18.67■□□□□ 0.58
BRAF-201ENST00000288602 EGFLAMQ63HQ2 1017 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 TBPL2Q6SJ96 375 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 TMPRSS11BQ86T26 416 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 CARM1Q86X55 608 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 SYT12Q8IV01 421 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 RIMKLAQ8IXN7 391 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 TBC1D21Q8IYX1 336 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 C2orf73Q8N5S3 287 aaPredicted RBP18.67■□□□□ 0.58
BRAF-201ENST00000288602 OR10Q1Q8NGQ4 319 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 ATL1Q8WXF7 558 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 CHFRQ96EP1 664 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 PBX4Q9BYU1 374 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 PRSS16Q9NQE7 514 aa18.67■□□□□ 0.58
BRAF-201ENST00000288602 TRBV5-3A0A0A0MS03 114 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 ZNF23P17027 643 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 TXNL4AP83876 142 aaKnown RBP18.66■□□□□ 0.58
BRAF-201ENST00000288602 NKG7Q16617 165 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 TMEM214Q6NUQ4 689 aaKnown RBP18.66■□□□□ 0.58
BRAF-201ENST00000288602 OR56A3Q8NH54 315 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 MAGEE2Q8TD90 523 aaPredicted RBP18.66■□□□□ 0.58
BRAF-201ENST00000288602 PPP1R16AQ96I34 528 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 SOX17Q9H6I2 414 aaPredicted RBP18.66■□□□□ 0.58
BRAF-201ENST00000288602 KAT8Q9H7Z6 458 aaKnown RBP18.66■□□□□ 0.58
BRAF-201ENST00000288602 LIMD1Q9UGP4 676 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 MAGED1Q9Y5V3 778 aaPredicted RBP18.66■□□□□ 0.58
BRAF-201ENST00000288602 LINC01565O15544 149 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 GMNNO75496 209 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 POP7O75817 140 aaKnown RBP18.66■□□□□ 0.58
BRAF-201ENST00000288602 CLPTM1O96005 669 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 LDLRP01130 860 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 CDH1P12830 882 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 CALRP27797 417 aaKnown RBP18.66■□□□□ 0.58
BRAF-201ENST00000288602 POLE2P56282 527 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 TBPL1P62380 186 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 EIF4HQ15056 248 aaKnown RBP18.66■□□□□ 0.58
BRAF-201ENST00000288602 GPR180Q86V85 440 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 APLFQ8IW19 511 aaPredicted RBP18.66■□□□□ 0.58
BRAF-201ENST00000288602 GPR156Q8NFN8 814 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 TFAP2CQ92754 450 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 KXD1Q9BQD3 176 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 C9orf16Q9BUW7 83 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 KCNH6Q9H252 994 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 TRIM39Q9HCM9 518 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 THG1LQ9NWX6 298 aaKnown RBP18.66■□□□□ 0.58
BRAF-201ENST00000288602 TMED5Q9Y3A6 229 aa18.66■□□□□ 0.58
BRAF-201ENST00000288602 ELOVL7A1L3X0 281 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 PAPLNO95428 1278 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 TFAP2AP05549 437 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 FCGR1AP12314 374 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 MAPK1P28482 360 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 PTPN6P29350 595 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 MEF2AQ02078 507 aaPredicted RBP18.65■□□□□ 0.58
BRAF-201ENST00000288602 OTUD3Q5T2D3 398 aaPredicted RBP18.65■□□□□ 0.58
BRAF-201ENST00000288602 GRHL2Q6ISB3 625 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 KRT80Q6KB66 452 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 FAM83HQ6ZRV2 1179 aaPredicted RBP18.65■□□□□ 0.58
BRAF-201ENST00000288602 FAM47BQ8NA70 645 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 CXorf40AQ8TE69 158 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 REXO4Q9GZR2 422 aaKnown RBP18.65■□□□□ 0.58
BRAF-201ENST00000288602 PLAGL1Q9UM63 463 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 ERVK-11Q9UQG0 969 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 COL4A3Q01955 1670 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 UGDHO60701 494 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 RUNX3Q13761 415 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 UGT8Q16880 541 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 BCL7AQ4VC05 210 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 ZNF551Q7Z340 670 aaPredicted RBP18.65■□□□□ 0.58
BRAF-201ENST00000288602 GALNT13Q8IUC8 556 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 METTL25Q8N6Q8 603 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 OR7G3Q8NG95 312 aa18.65■□□□□ 0.58
BRAF-201ENST00000288602 HUS1BQ8NHY5 278 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms