RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 C8orf82Q6P1X6 216 aaPredicted RBP13.05□□□□□ -0.32
SCAF4-201ENST00000286835 CCBE1Q6UXH8 406 aaPredicted RBP13.05□□□□□ -0.32
SCAF4-201ENST00000286835 ZBTB2Q8N680 514 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 ZNF548Q8NEK5 533 aaPredicted RBP13.05□□□□□ -0.32
SCAF4-201ENST00000286835 KCNJ9Q92806 393 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 GPRC5BQ9NZH0 403 aa13.05□□□□□ -0.32
SCAF4-201ENST00000286835 ACSL4O60488 711 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 TBL1XO60907 577 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 CORO1AP31146 461 aaKnown RBP13.04□□□□□ -0.32
SCAF4-201ENST00000286835 RRM2P31350 389 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 DNAJA1P31689 397 aaKnown RBP13.04□□□□□ -0.32
SCAF4-201ENST00000286835 CHI3L1P36222 383 aaPredicted RBP13.04□□□□□ -0.32
SCAF4-201ENST00000286835 CACNG1Q06432 222 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 UBE2UQ5VVX9 321 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 USP51Q70EK9 711 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 CEP68Q76N32 757 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 GLB1L3Q8NCI6 653 aaPredicted RBP13.04□□□□□ -0.32
SCAF4-201ENST00000286835 WDR36Q8NI36 951 aaKnown RBP13.04□□□□□ -0.32
SCAF4-201ENST00000286835 ATL1Q8WXF7 558 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 ITPKCQ96DU7 683 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 C1orf74Q96LT6 269 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 BEX2Q9BXY8 128 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 TNKS2Q9H2K2 1166 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 SPATA7Q9P0W8 599 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 DNMT3LQ9UJW3 386 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 MGAMO43451 1857 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 MANBAO00462 879 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 STK25O00506 426 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 MTX2O75431 263 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 ERN1O75460 977 aaKnown RBP13.04□□□□□ -0.32
SCAF4-201ENST00000286835 EPHA2P29317 976 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 GATMP50440 423 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 PPP5CP53041 499 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 ISL1P61371 349 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 ZFP69Q49AA0 526 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 CATSPEREQ5SY80 951 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 ZNF648Q5T619 568 aaPredicted RBP13.04□□□□□ -0.32
SCAF4-201ENST00000286835 ZNF691Q5VV52 312 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 KIAA1614Q5VZ46 1190 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 DESI1Q6ICB0 168 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 OR6Q1Q8NGQ2 317 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 CNPPD1Q9BV87 410 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 KLHL20Q9Y2M5 609 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 POLR2AP24928 1970 aaKnown RBP13.04□□□□□ -0.32
SCAF4-201ENST00000286835 KRT87PA6NCN2 255 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 RFPL2O75678 378 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 GABARAPL2P60520 117 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 GANABQ14697 944 aaKnown RBP13.04□□□□□ -0.32
SCAF4-201ENST00000286835 SLC14A2Q15849 920 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 ZNF697Q5TEC3 545 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 SERINC5Q86VE9 423 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 YAF2Q8IY57 180 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 FAM83FQ8NEG4 500 aaPredicted RBP13.04□□□□□ -0.32
SCAF4-201ENST00000286835 DOK1Q99704 481 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 MAGEH1Q9H213 219 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 NEK6Q9HC98 313 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 SCML2Q9UQR0 700 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 B3GNT3Q9Y2A9 372 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 PMF1-BGLAPU3KQ54 211 aa13.04□□□□□ -0.32
SCAF4-201ENST00000286835 MAGEB17A8MXT2 336 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 KPNA5O15131 536 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 EPOP01588 193 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 STSP08842 583 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 CTNNB1P35222 781 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 MAPKAPK2P49137 400 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 OR2B6P58173 313 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 CREMQ03060 361 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 UAP1L1Q3KQV9 507 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 XKR6Q5GH73 641 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 MAL2Q969L2 176 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 MYEOVQ96EZ4 313 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 SUSD3Q96L08 255 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 CITED4Q96RK1 184 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 IL4I1Q96RQ9 567 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 NECTIN3Q9NQS3 549 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 DCAF13Q9NV06 445 aaKnown RBP13.03□□□□□ -0.32
SCAF4-201ENST00000286835 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.03□□□□□ -0.32
SCAF4-201ENST00000286835 IL37Q9NZH6 218 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 CD84Q9UIB8 345 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 PCDHGA10Q9Y5H3 936 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 CLDN7O95471 211 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 TRBC1P01850 177 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 RPLP0P05388 317 aaKnown RBP13.03□□□□□ -0.32
SCAF4-201ENST00000286835 JUNBP17275 347 aaPredicted RBP13.03□□□□□ -0.32
SCAF4-201ENST00000286835 PHC1P78364 1004 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 KRR1Q13601 381 aaKnown RBP13.03□□□□□ -0.32
SCAF4-201ENST00000286835 SYTL3Q4VX76 610 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.03□□□□□ -0.32
SCAF4-201ENST00000286835 RIMKLAQ8IXN7 391 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 PAWRQ96IZ0 340 aaKnown RBP13.03□□□□□ -0.32
SCAF4-201ENST00000286835 COPS8Q99627 209 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 IGFLR1Q9H665 355 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 ABCB9Q9NP78 766 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 DLGAP4Q9Y2H0 992 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 TPD52L2O43399 206 aaKnown RBP13.03□□□□□ -0.32
SCAF4-201ENST00000286835 PDYNP01213 254 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 CCL5P13501 91 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 FPR1P21462 350 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 ST8SIA6P61647 398 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 ABRQ12979 859 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms