RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 PCDHB11Q9Y5F2 797 aa18.26■□□□□ 0.51
PDLIM3-202ENST00000284770 DMDP11532 3685 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 E7EQ34 232 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 PRICKLE3O43900 615 aaPredicted RBP18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 UGDHO60701 494 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 PRAMEF4O60810 478 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 CRCPO75575 148 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 WFS1O76024 890 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 RETP07949 1114 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 CHRM5P08912 532 aaPredicted RBP18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 UROSP10746 265 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 ENGP17813 658 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 SERPINB3P29508 390 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 CHIT1Q13231 466 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 BIRC2Q13490 618 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 SLC9B1Q4ZJI4 515 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 PRAMEF9Q5VWM5 478 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 KANK2Q63ZY3 851 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 CDYL2Q8N8U2 506 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 L3MBTL4Q8NA19 623 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 KYQ8NBH2 561 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 OR2A1Q8NGT9 310 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 OR2I1PQ8NGU4 316 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 STON2Q8WXE9 905 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 KCNA7Q96RP8 456 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 ACAT2Q9BWD1 397 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 GTPBP2Q9BX10 602 aaKnown RBP18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 TRPS1Q9UHF7 1281 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 RNF11Q9Y3C5 154 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 FIS1Q9Y3D6 152 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 VPS13AQ96RL7 3174 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 BTN3A3O00478 584 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 ENO1P06733 434 aaKnown RBP18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 ALPPL2P10696 532 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 HGFP14210 728 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 CASP2P42575 452 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 IRF8Q02556 426 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 E2F2Q14209 437 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 UGT3A2Q3SY77 523 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 GGTA1PQ4G0N0 100 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 XKR6Q5GH73 641 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 LIPJQ5W064 366 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 FAM219BQ5XKK7 198 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 TCEAL6Q6IPX3 200 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 SLCO4C1Q6ZQN7 724 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 YTHDF3Q7Z739 585 aaKnown RBP18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 MTDHQ86UE4 582 aaKnown RBP18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 ALYREFQ86V81 257 aaKnown RBP18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 METTL6Q8TCB7 284 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 SLC5A11Q8WWX8 675 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 TCEAL3Q969E4 200 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 MAGEB10Q96LZ2 347 aaPredicted RBP18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 LRRC37BQ96QE4 947 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 NUF2Q9BZD4 464 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 SPHK1Q9NYA1 384 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 SH2B3Q9UQQ2 575 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 TIMM22Q9Y584 194 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 DNAJC15Q9Y5T4 150 aa18.25■□□□□ 0.51
PDLIM3-202ENST00000284770 HGSO14964 777 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 PCDHGA12O60330 932 aa18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 CAPN1P07384 714 aa18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 PSMB5P28074 263 aa18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 PEBP1P30086 187 aaKnown RBP18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 PRDX1Q06830 199 aaKnown RBP18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 DMTNQ08495 405 aa18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 TBCCQ15814 346 aa18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 ZCCHC8Q6NZY4 707 aaKnown RBP18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 C17orf64Q86WR6 236 aa18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 ZNF761Q86XN6 746 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 MYLK4Q86YV6 388 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 SLC35F3Q8IY50 421 aa18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 CHCHD4Q8N4Q1 142 aa18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 OR4C6Q8NH72 309 aa18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 SLC22A18Q96BI1 424 aa18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 EHD1Q9H4M9 534 aa18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 LAMA1P25391 3075 aa18.24■□□□□ 0.51
PDLIM3-202ENST00000284770 PIPSLA2A3N6 862 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 OR6C74A6NCV1 312 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 TRIM38O00635 465 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 DIAPH2O60879 1101 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 ATXN3P54252 364 aaPredicted RBP18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 DOC2AQ14183 400 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 KIR2DS3Q14952 304 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 PDCD2Q16342 344 aaPredicted RBP18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 ICE2Q659A1 982 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 ATG9BQ674R7 924 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 TMPRSS11BQ86T26 416 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 HOMEZQ8IX15 550 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 MINDY1Q8N5J2 469 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 ERP27Q96DN0 273 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 WDR34Q96EX3 536 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 MAELQ96JY0 434 aaKnown RBP18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 SLC38A3Q99624 504 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 TBC1D10AQ9BXI6 508 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 MYLK2Q9H1R3 596 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 APOBEC2Q9Y235 224 aaKnown RBP18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 MYO15AQ9UKN7 3530 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 ADAMTS9Q9P2N4 1935 aa18.23■□□□□ 0.51
PDLIM3-202ENST00000284770 LILRA5A6NI73 299 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms