RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CTU2Q2VPK5 515 aaKnown RBP17.82■□□□□ 0.44
PDLIM3-201ENST00000284767 FAM78AQ5JUQ0 283 aa17.82■□□□□ 0.44
PDLIM3-201ENST00000284767 KIAA0907Q7Z7F0 614 aaPredicted RBP17.82■□□□□ 0.44
PDLIM3-201ENST00000284767 CBARPQ8N350 705 aaPredicted RBP17.82■□□□□ 0.44
PDLIM3-201ENST00000284767 CELF5Q8N6W0 485 aaKnown RBP17.82■□□□□ 0.44
PDLIM3-201ENST00000284767 ZNF583Q96ND8 569 aa17.82■□□□□ 0.44
PDLIM3-201ENST00000284767 NODALQ96S42 347 aa17.82■□□□□ 0.44
PDLIM3-201ENST00000284767 PSD2Q9BQI7 771 aa17.82■□□□□ 0.44
PDLIM3-201ENST00000284767 SMURF2Q9HAU4 748 aa17.82■□□□□ 0.44
PDLIM3-201ENST00000284767 MARK1Q9P0L2 795 aa17.82■□□□□ 0.44
PDLIM3-201ENST00000284767 COMMD10Q9Y6G5 202 aa17.82■□□□□ 0.44
PDLIM3-201ENST00000284767 DGKBQ9Y6T7 804 aa17.82■□□□□ 0.44
PDLIM3-201ENST00000284767 C2orf16Q68DN1 1984 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 E2F3O00716 465 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 OR4F21O95013 312 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 CST1P01037 141 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 CISD3P0C7P0 127 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 PCMT1P22061 227 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 RPS3P23396 243 aaKnown RBP eCLIP17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 EIF2B2P49770 351 aaKnown RBP17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 PHKG1Q16816 387 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 LDLRAP1Q5SW96 308 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 HSD11B1LQ7Z5J1 315 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 HEPHQ9BQS7 1158 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 NSUN3Q9H649 340 aaKnown RBP17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 PLXNB3Q9ULL4 1909 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 TMEM247A6NEH6 219 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 PRRT4C9JH25 899 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 HPCAL1P37235 193 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 PIGAP37287 484 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 SPINT3P49223 89 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 KCNAB2Q13303 367 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 IL18R1Q13478 541 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 ZNF648Q5T619 568 aaPredicted RBP17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 MBOAT1Q6ZNC8 495 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 CDYL2Q8N8U2 506 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 OR2T12Q8NG77 320 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 OR52E4Q8NGH9 312 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 IGFLR1Q9H665 355 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 C3orf18Q9UK00 162 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 PCDHGB1Q9Y5G3 927 aa17.81■□□□□ 0.44
PDLIM3-201ENST00000284767 ATG2AQ2TAZ0 1938 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 HTR3EA5X5Y0 456 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 AGAP14A8MT82 685 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 ZNF99A8MXY4 864 aaPredicted RBP17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 SLC1A7O00341 560 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 GSTA4O15217 222 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 NDUFS2O75306 463 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 HLA-EP13747 358 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 ETV3P41162 512 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 GP2P55259 537 aaKnown RBP17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 ISL1P61371 349 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 GPRC6AQ5T6X5 926 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 CYP20A1Q6UW02 462 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 Q6ZVL8 140 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 NPAS3Q8IXF0 933 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 ZNF566Q969W8 418 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 SLC47A1Q96FL8 570 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 HBEGFQ99075 208 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 ACTL8Q9H568 366 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 CARS2Q9HA77 564 aaKnown RBP17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 PCDH12Q9NPG4 1184 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 ITM2BQ9Y287 266 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 NEUROG3Q9Y4Z2 214 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 RFXAPO00287 272 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 SLC22A1O15245 554 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 GABARAPO95166 117 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 CCDC159P0C7I6 412 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 G6PDP11413 515 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 FUT4P22083 530 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 ARL1P40616 181 aaPredicted RBP17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 GDF5P43026 501 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 GPR33Q49SQ1 333 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 ZNF691Q5VV52 312 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 LAIR2Q6ISS4 152 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 ZBTB2Q8N680 514 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 FIG4Q92562 907 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 OTUB2Q96DC9 234 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 HTATIP2Q9BUP3 242 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 ELOVL2Q9NXB9 296 aa17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 FAM32AQ9Y421 112 aaKnown RBP17.8■□□□□ 0.44
PDLIM3-201ENST00000284767 LOC100130705A0A1B0GUX0 176 aa17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 KRT87PA6NCN2 255 aa17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 EPOPA6NHQ4 379 aa17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 WASH3PC4AMC7 463 aa17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 GNGT2O14610 69 aa17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 ANKRD28O15084 1053 aa17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 NOBOXO60393 691 aa17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 RYKP34925 604 aa17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 DMC1Q14565 340 aa17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 ACOX1Q15067 660 aa17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 HABP4Q5JVS0 413 aaKnown RBP17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 ENPP6Q6UWR7 440 aa17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 PIWIL3Q7Z3Z3 882 aaKnown RBP17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 BTLAQ7Z6A9 289 aa17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 SLCO6A1Q86UG4 719 aa17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 FAM86B1Q8N7N1 296 aa17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 FBXO30Q8TB52 745 aa17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 FGF13Q92913 245 aa17.79■□□□□ 0.44
PDLIM3-201ENST00000284767 COPS8Q99627 209 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms