RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 OR6C3Q9NZP0 311 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 CHMP5Q9NZZ3 219 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 SPATA7Q9P0W8 599 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 KLQ9UEF7 1012 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 ANGPTL2Q9UKU9 493 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 KIAA1257Q9ULG3 409 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 MFHAS1Q9Y4C4 1052 aa4.46□□□□□ -1.7
CD44-202ENST00000278385 CASP8AP2Q9UKL3 1982 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 TRAV6A0A075B6T7 132 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 LOC100506127A0A0U1RQW1 187 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 A0A1B0GTQ1 180 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 A0A1B0GTW7 788 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 CDHR4A6H8M9 788 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 NPIPB5A8MRT5 1133 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 USP17L23D6RBM5 183 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 SPECC1L-ADORA2AF8WAN1 911 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 K7ERQ8 282 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 IFNL4K9M1U5 179 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 M0QZQ0 153 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 TLR4O00206 839 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 XPO1O14980 1071 aaKnown RBP4.45□□□□□ -1.7
CD44-202ENST00000278385 CHADO15335 359 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 PRKAB2O43741 272 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 RAMP2O60895 175 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 B4GALT2O60909 372 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 HSF2BPO75031 334 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 CRCPO75575 148 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 TOM1L1O75674 476 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 CDKL5O76039 1030 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 CXCL10P02778 98 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 IQCF3P0C7M6 154 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 ATXN1LP0C7T5 689 aaKnown RBP4.45□□□□□ -1.7
CD44-202ENST00000278385 EBLN1P0CF75 366 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 CLUP10909 449 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 G6PDP11413 515 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 GCFC2P16383 781 aaKnown RBP4.45□□□□□ -1.7
CD44-202ENST00000278385 DRD5P21918 477 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 ACAT1P24752 427 aaKnown RBP4.45□□□□□ -1.7
CD44-202ENST00000278385 U2AF2P26368 475 aaKnown RBP eCLIP4.45□□□□□ -1.7
CD44-202ENST00000278385 PBX1P40424 430 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 CDKN1BP46527 198 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 HTR6P50406 440 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 GATMP50440 423 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 ARSFP54793 590 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 INHBCP55103 352 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 KRTAP10-2P60368 255 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 SRP54P61011 504 aaKnown RBP4.45□□□□□ -1.7
CD44-202ENST00000278385 SLC25A3Q00325 362 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 RESTQ13127 1097 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 DNAJC3Q13217 504 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 SRSF5Q13243 272 aaKnown RBP4.45□□□□□ -1.7
CD44-202ENST00000278385 COTL1Q14019 142 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 Q3ZCU0 254 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 SBK1Q52WX2 424 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 FSCBQ5H9T9 825 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 FAM102AQ5T9C2 384 aaPredicted RBP4.45□□□□□ -1.7
CD44-202ENST00000278385 FAM90A2PQ658T7 463 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 PMF1Q6P1K2 205 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 CASC4Q6P4E1 433 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 ERICH5Q6P6B1 374 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 CLEC9AQ6UXN8 241 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 NANOGNBQ7Z5D8 188 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 ADIPOR2Q86V24 386 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 ZDHHC21Q8IVQ6 265 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 C4orf19Q8IY42 314 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 SRRM1Q8IYB3 904 aaKnown RBP4.45□□□□□ -1.7
CD44-202ENST00000278385 CLEC1AQ8NC01 280 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 TMIEQ8NEW7 156 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 TMEM185AQ8NFB2 350 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 BBS1Q8NFJ9 593 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 OR8J1Q8NGP2 316 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 FAM110DQ8TAY7 271 aaPredicted RBP4.45□□□□□ -1.7
CD44-202ENST00000278385 ATP8B4Q8TF62 1192 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 HEXDCQ8WVB3 486 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 SOCS4Q8WXH5 440 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 NPIPB3Q92617 1050 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 LPAR1Q92633 364 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 DPF1Q92782 380 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 CAVIN3Q969G5 261 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 ST6GALNAC6Q969X2 333 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 RRNAD1Q96FB5 475 aaKnown RBP4.45□□□□□ -1.7
CD44-202ENST00000278385 FAR2Q96K12 515 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 ZBTB45Q96K62 511 aaPredicted RBP4.45□□□□□ -1.7
CD44-202ENST00000278385 GPA33Q99795 319 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 H2AFJQ9BTM1 129 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 ALOXE3Q9BYJ1 711 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 PKIBQ9C010 78 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 TTYH3Q9C0H2 523 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 FAM192AQ9GZU8 254 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 NSRP1Q9H0G5 558 aaKnown RBP4.45□□□□□ -1.7
CD44-202ENST00000278385 MVB12BQ9H7P6 319 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 METTL7AQ9H8H3 244 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 SRD5A3Q9H8P0 318 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 KIF9Q9HAQ2 790 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 GALNT9Q9HCQ5 603 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 SLC6A13Q9NSD5 602 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 FAM120CQ9NX05 1096 aaKnown RBP4.45□□□□□ -1.7
CD44-202ENST00000278385 TMEM161AQ9NX61 479 aa4.45□□□□□ -1.7
CD44-202ENST00000278385 PLK2Q9NYY3 685 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms