RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 SLC25A11Q02978 314 aaKnown RBP11.19□□□□□ -0.62
USP53-201ENST00000274030 FPGSQ05932 587 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 MERTKQ12866 999 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 KCNJ11Q14654 390 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 SLC35G1Q2M3R5 365 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 IQCCQ4KMZ1 466 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 ANKRD26P1Q6NSI1 321 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 LGI4Q8N135 537 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 PHTF2Q8N3S3 785 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 TBL1XR1Q9BZK7 514 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 OR51B5Q9H339 312 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 HEBP2Q9Y5Z4 205 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 EFCAB9A8MZ26 197 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 RPLP0P05388 317 aaKnown RBP11.19□□□□□ -0.62
USP53-201ENST00000274030 SLC7A1P30825 629 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 HOXC12P31275 282 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 SLC11A1P49279 550 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 DHPSP49366 369 aaPredicted RBP11.19□□□□□ -0.62
USP53-201ENST00000274030 DSTNP60981 165 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 DLG1Q12959 904 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 CHAF1BQ13112 559 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 LAPTM4AQ15012 233 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 FRMD7Q6ZUT3 714 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 TRIM74Q86UV6 250 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 ARMC10Q8N2F6 343 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 POF1BQ8WVV4 589 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 ZNF514Q96K75 400 aaPredicted RBP11.19□□□□□ -0.62
USP53-201ENST00000274030 CGREF1Q99674 301 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 KXD1Q9BQD3 176 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 IFT46Q9NQC8 304 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 FLRT1Q9NZU1 646 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 PRAMEF33A0A0G2JMD5 474 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 PRAMEF10O60809 474 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 SEMA3DO95025 777 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 RPP14O95059 124 aaKnown RBP11.19□□□□□ -0.62
USP53-201ENST00000274030 PIGRP01833 764 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 ITGB1P05556 798 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 LINGO3P0C6S8 592 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 CDKN1CP49918 316 aaPredicted RBP11.19□□□□□ -0.62
USP53-201ENST00000274030 TEAD2Q15562 447 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 SMYD5Q6GMV2 418 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 PRR23BQ6ZRT6 265 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 TMPRSS9Q7Z410 1059 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 OR8H1Q8NGG4 311 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 CCM2Q9BSQ5 444 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 FAM159BA6NKW6 160 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 ZNF99A8MXY4 864 aaPredicted RBP11.18□□□□□ -0.62
USP53-201ENST00000274030 CD36P16671 472 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 GDI2P50395 445 aaKnown RBP11.18□□□□□ -0.62
USP53-201ENST00000274030 MYLK3Q32MK0 819 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 SWT1Q5T5J6 900 aaKnown RBP11.18□□□□□ -0.62
USP53-201ENST00000274030 CCSAPQ6IQ19 270 aaPredicted RBP11.18□□□□□ -0.62
USP53-201ENST00000274030 THOC6Q86W42 341 aaKnown RBP11.18□□□□□ -0.62
USP53-201ENST00000274030 RGMAQ96B86 450 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 ZNF347Q96SE7 839 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 NSUN3Q9H649 340 aaKnown RBP11.18□□□□□ -0.62
USP53-201ENST00000274030 MKKSQ9NPJ1 570 aaPredicted RBP11.18□□□□□ -0.62
USP53-201ENST00000274030 A0A0D9SEW6 157 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 PITPNM1O00562 1244 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 MID1O15344 667 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 B4GALT2O60909 372 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 H6PDO95479 791 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 TYRP14679 529 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 CSTF2P33240 577 aaKnown RBP eCLIP11.18□□□□□ -0.62
USP53-201ENST00000274030 PREPP48147 710 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 BLMHQ13867 455 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 SGCBQ16585 318 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 TIGD6Q17RP2 521 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 PTCHD3Q3KNS1 767 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 MLIPQ5VWP3 458 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 LRRTM4Q86VH4 590 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 OR2AJ1Q8NGZ0 328 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 B3GNT4Q9C0J1 378 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 ASB3Q9Y575 518 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 FKBP7Q9Y680 259 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.18□□□□□ -0.62
USP53-201ENST00000274030 CLDN25C9JDP6 229 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 RB1P06400 928 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 DPY19L1Q2PZI1 675 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 MS4A13Q5J8X5 152 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 NAXEQ8NCW5 288 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 WFIKKN2Q8TEU8 576 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 TFGQ92734 400 aaPredicted RBP11.18□□□□□ -0.62
USP53-201ENST00000274030 DHRS1Q96LJ7 313 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 ZDHHC4Q9NPG8 344 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 TIMMDC1Q9NPL8 285 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 TDP1Q9NUW8 608 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 GMEB2Q9UKD1 530 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 UTS2RQ9UKP6 389 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 TNFRSF10BO14763 440 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 CD2P06729 351 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 ADAM8P78325 824 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 CSTF1Q05048 431 aaKnown RBP11.18□□□□□ -0.62
USP53-201ENST00000274030 GRM2Q14416 872 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 TMBIM1Q969X1 311 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 FAXDC2Q96IV6 333 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 PRICKLE1Q96MT3 831 aaPredicted RBP11.18□□□□□ -0.62
USP53-201ENST00000274030 ZNF599Q96NL3 588 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 EFCAB11Q9BUY7 163 aa11.18□□□□□ -0.62
USP53-201ENST00000274030 RNF11Q9Y3C5 154 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms