RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 C11orf54Q9H0W9 315 aaPredicted RBP12.49□□□□□ -0.41
HERC6-202ENST00000273960 SLC23A1Q9UHI7 598 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 TTC3P53804 2025 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 MYO10Q9HD67 2058 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 CAPN5O15484 640 aaPredicted RBP12.49□□□□□ -0.41
HERC6-202ENST00000273960 FGF4P08620 206 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 DDOSTP39656 456 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 VLDLRP98155 873 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 PARP15Q460N3 678 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 PDZK1Q5T2W1 519 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 LDLRAD1Q5T700 205 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 FAM171A1Q5VUB5 890 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 DOK6Q6PKX4 331 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 C16orf62Q7Z3J2 963 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 RASSF5Q8WWW0 418 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 EXOC2Q96KP1 924 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 ATOH8Q96SQ7 321 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 NAALAD2Q9Y3Q0 740 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 GFRA2O00451 464 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 PSIP1O75475 530 aaKnown RBP12.49□□□□□ -0.41
HERC6-202ENST00000273960 OPN1SWP03999 348 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 NRIP1P48552 1158 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 CAV3P56539 151 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 PTPRNQ16849 979 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 OR2T5Q6IEZ7 315 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 OR4M1Q8NGD0 313 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 OR2T29Q8NH02 315 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 MS4A4AQ96JQ5 239 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 ZNF599Q96NL3 588 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 DUSP16Q9BY84 665 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 ACOXLQ9NUZ1 547 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 ACTL7AQ9Y615 435 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 MYBPHLA2RUH7 354 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 HMX3A6NHT5 357 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 PLK4O00444 970 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 LRRTM2O43300 516 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 UROSP10746 265 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 PSEN2P49810 448 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 DBPQ10586 325 aaPredicted RBP12.48□□□□□ -0.41
HERC6-202ENST00000273960 FAPQ12884 760 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 ARHGEF6Q15052 776 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 KIAA1614Q5VZ46 1190 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 RANBP10Q6VN20 620 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 CIR1Q86X95 450 aaPredicted RBP12.48□□□□□ -0.41
HERC6-202ENST00000273960 RASAL3Q86YV0 1011 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 WDR36Q8NI36 951 aaKnown RBP12.48□□□□□ -0.41
HERC6-202ENST00000273960 DIRAS2Q96HU8 199 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 PYURFQ96I23 114 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 FCRL5Q96RD9 977 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 IMPAD1Q9NX62 359 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 MKLN1Q9UL63 735 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 PCDHB5Q9Y5E4 795 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 PRRC2BQ5JSZ5 2229 aaKnown RBP12.48□□□□□ -0.41
HERC6-202ENST00000273960 SMIM28A0A1B0GU29 152 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 CLDN24A6NM45 220 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 SLC16A6O15403 523 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 CPSF4O95639 269 aaKnown RBP12.48□□□□□ -0.41
HERC6-202ENST00000273960 FCER2P06734 321 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 SERPINF2P08697 491 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 TSPAN19P0C672 248 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 THPOP40225 353 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 CCT3P49368 545 aaKnown RBP12.48□□□□□ -0.41
HERC6-202ENST00000273960 RGS6P49758 472 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 AFF1P51825 1210 aaKnown RBP12.48□□□□□ -0.41
HERC6-202ENST00000273960 PRKCDQ05655 676 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 GALNT1Q10472 559 aaPredicted RBP12.48□□□□□ -0.41
HERC6-202ENST00000273960 NPRL3Q12980 569 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 SNTA1Q13424 505 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 OR56A4Q8NGH8 313 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 EEF1AKMT1Q8WVE0 214 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 GGHQ92820 318 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 RIT1Q92963 219 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 ASPNQ9BXN1 380 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 SMURF1Q9HCE7 757 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 FLRT1Q9NZU1 646 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 NLKQ9UBE8 527 aa12.48□□□□□ -0.41
HERC6-202ENST00000273960 C17orf102A2RUQ5 167 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 AREL1O15033 823 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 MAFKO60675 156 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 DNAJB5O75953 348 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 B3GAT3O94766 335 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 HMBSP08397 361 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 HOXA9P31269 272 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 CCL23P55773 120 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 SLC14A1Q13336 389 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 CAMK2GQ13555 558 aaPredicted RBP12.47□□□□□ -0.41
HERC6-202ENST00000273960 DOCK1Q14185 1865 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 DUSP7Q16829 419 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 ZMIZ2Q8NF64 920 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 SCAMP5Q8TAC9 235 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 SPPL2AQ8TCT8 520 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 ISG20Q96AZ6 181 aaKnown RBP12.47□□□□□ -0.41
HERC6-202ENST00000273960 TMCO6Q96DC7 493 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 SIPA1Q96FS4 1042 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 FRMD6Q96NE9 622 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 RDH12Q96NR8 316 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 IL4I1Q96RQ9 567 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 PPIL3Q9H2H8 161 aaKnown RBP12.47□□□□□ -0.41
HERC6-202ENST00000273960 DYRK4Q9NR20 520 aa12.47□□□□□ -0.41
HERC6-202ENST00000273960 B8ZZF3 427 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms