RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 INO80DQ53TQ3 878 aaPredicted RBP21.52■■□□□ 1.04
CDR2-201ENST00000268383 ADCK1Q86TW2 530 aa21.52■■□□□ 1.04
CDR2-201ENST00000268383 CADM3Q8N126 398 aa21.52■■□□□ 1.04
CDR2-201ENST00000268383 PCSK9Q8NBP7 692 aaKnown RBP21.52■■□□□ 1.04
CDR2-201ENST00000268383 OR52E4Q8NGH9 312 aa21.52■■□□□ 1.04
CDR2-201ENST00000268383 FBLIM1Q8WUP2 373 aa21.52■■□□□ 1.04
CDR2-201ENST00000268383 ALG14Q96F25 216 aa21.52■■□□□ 1.04
CDR2-201ENST00000268383 PANX1Q96RD7 426 aa21.52■■□□□ 1.04
CDR2-201ENST00000268383 CDK5RAP1Q96SZ6 601 aaKnown RBP21.52■■□□□ 1.04
CDR2-201ENST00000268383 SLC32A1Q9H598 525 aa21.52■■□□□ 1.04
CDR2-201ENST00000268383 SAMHD1Q9Y3Z3 626 aaKnown RBP21.52■■□□□ 1.04
CDR2-201ENST00000268383 KPNA4O00629 521 aaPredicted RBP21.51■■□□□ 1.03
CDR2-201ENST00000268383 ITGAMP11215 1152 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 KRT20P35900 424 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 FCGRTP55899 365 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 ATP13A5Q4VNC0 1218 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 MFSD4AQ8N468 514 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 ATG16L2Q8NAA4 619 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 YIPF6Q96EC8 236 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 IL1RAPQ9NPH3 570 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 TRIM17Q9Y577 477 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 ANAPC1Q9H1A4 1944 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 SCN8AQ9UQD0 1980 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 H7C4K7 107 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 CLIC1O00299 241 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 WNT9AO14904 365 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 HALP42357 657 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 MAGEA2P43356 314 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 CREMQ03060 361 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 BOP1Q14137 746 aaKnown RBP21.51■■□□□ 1.03
CDR2-201ENST00000268383 KDM4DQ6B0I6 523 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 BTBD2Q9BX70 525 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 MROQ9BYG7 248 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 DUSP21Q9H596 190 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 RMND5AQ9H871 391 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 LRFN2Q9ULH4 789 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 MAN2B2Q9Y2E5 1009 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 MICAL3Q7RTP6 2002 aa21.51■■□□□ 1.03
CDR2-201ENST00000268383 TRBV5-4A0A0C4DH59 114 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 FPGTO14772 594 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 COL6A1P12109 1028 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 STK19P49842 368 aaPredicted RBP21.5■■□□□ 1.03
CDR2-201ENST00000268383 MVKQ03426 396 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 CARTPTQ16568 116 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 INAVAQ3KP66 663 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 ADNP2Q6IQ32 1131 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 MACC1Q6ZN28 852 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 ARL14EPQ8N8R7 260 aaPredicted RBP21.5■■□□□ 1.03
CDR2-201ENST00000268383 UBTD2Q8WUN7 234 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 MAL2Q969L2 176 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 HSH2DQ96JZ2 352 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 ZNF300Q96RE9 604 aaPredicted RBP21.5■■□□□ 1.03
CDR2-201ENST00000268383 VN1R3Q9BXE9 311 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 PRM3Q9NNZ6 103 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.5■■□□□ 1.03
CDR2-201ENST00000268383 VIPP01282 170 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 ACVR2AP27037 513 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 RAB15P59190 212 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 MTA1Q13330 715 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 TXNDC8Q6A555 127 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 SERPINA13PQ6UXR4 307 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 TPGS1Q6ZTW0 290 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 PAGE2Q7Z2X7 111 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 HORMAD1Q86X24 394 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 FOXJ1Q92949 421 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 MTERF1Q99551 399 aaKnown RBP21.5■■□□□ 1.03
CDR2-201ENST00000268383 EPS8L2Q9H6S3 715 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 ASIC5Q9NY37 505 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 KIF17Q9P2E2 1029 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 BTBD3Q9Y2F9 522 aa21.5■■□□□ 1.03
CDR2-201ENST00000268383 TRIM43BA6NCK2 446 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 CCNDBP1O95273 360 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 KCNK5O95279 499 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 SPAM1P38567 509 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 ACOT13Q9NPJ3 140 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 PCDHGA12O60330 932 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 TNFRSF1BP20333 461 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 CTSOP43234 321 aaPredicted RBP21.49■■□□□ 1.03
CDR2-201ENST00000268383 MAGEA8P43361 318 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 KIR3DL1P43629 444 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 NKX3-2P78367 333 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 RFX4Q33E94 735 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 PRSS36Q5K4E3 855 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 DGKKQ5KSL6 1271 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 CAPN13Q6MZZ7 669 aaPredicted RBP21.49■■□□□ 1.03
CDR2-201ENST00000268383 PTOV1Q86YD1 416 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 ZZZ3Q8IYH5 903 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 DYNC2LI1Q8TCX1 351 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 ZNF566Q969W8 418 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 P2RY13Q9BPV8 354 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 HTATIP2Q9BUP3 242 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 KRT84Q9NSB2 600 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 SAMD4AQ9UPU9 718 aaKnown RBP21.49■■□□□ 1.03
CDR2-201ENST00000268383 TPRKBQ9Y3C4 175 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 KCNE1BA0A087WTH5 132 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 EVPLLA8MZ36 301 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 M0QX08 132 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 FABP3P05413 133 aa21.49■■□□□ 1.03
CDR2-201ENST00000268383 MAD2L1BPQ15013 274 aaPredicted RBP21.49■■□□□ 1.03
CDR2-201ENST00000268383 UGT8Q16880 541 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms