RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ITPAQ9BY32 194 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 PLCL2Q9UPR0 1127 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 AKAP12Q02952 1782 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 A0A1W2PRQ8 180 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 L7N2F9 121 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 CSKP41240 450 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 LILRA4P59901 499 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 VAMP2P63027 116 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 EIF2S3LQ2VIR3 472 aaKnown RBP17.58■□□□□ 0.41
COL5A3-201ENST00000264828 OR4F3Q6IEY1 312 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 ARL9Q6T311 187 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 OXR1Q8N573 874 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 C1orf216Q8TAB5 229 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 SCAMP5Q8TAC9 235 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 PKP2Q99959 881 aa17.58■□□□□ 0.41
COL5A3-201ENST00000264828 NDRG2Q9UN36 371 aaKnown RBP17.58■□□□□ 0.41
COL5A3-201ENST00000264828 GNAZP19086 355 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 FOXM1Q08050 763 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 NAXEQ8NCW5 288 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 ASB9Q96DX5 294 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 SLC22A2O15244 555 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 BCHEP06276 602 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 ILF3Q12906 894 aaKnown RBP eCLIP17.58■□□□□ 0.4
COL5A3-201ENST00000264828 ARFRP1Q13795 201 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 SYVN1Q86TM6 617 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 PLD4Q96BZ4 506 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 TMEM209Q96SK2 561 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 NIFKQ9BYG3 293 aaKnown RBP17.58■□□□□ 0.4
COL5A3-201ENST00000264828 MOCS1Q9NZB8 636 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 ZDHHC2Q9UIJ5 367 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 METTL21EPA6NDL7 271 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 A8MUA0 341 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 PRMT3O60678 531 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 CH25HO95992 272 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 LHCGRP22888 699 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 PIM3Q86V86 326 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 SNX29P2Q8IUI4 249 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 HSPBAP1Q96EW2 488 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 EHD1Q9H4M9 534 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 ZNF395Q9H8N7 513 aaPredicted RBP17.58■□□□□ 0.4
COL5A3-201ENST00000264828 ABCG2Q9UNQ0 655 aa17.58■□□□□ 0.4
COL5A3-201ENST00000264828 M0R036 132 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 HLA-DQB2P05538 268 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 ALPIP09923 528 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 CYP3A5P20815 502 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 DSTNP60981 165 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 SLBPQ14493 270 aaKnown RBP eCLIP17.57■□□□□ 0.4
COL5A3-201ENST00000264828 ODF4Q2M2E3 257 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 PLCZ1Q86YW0 608 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 IRF2BPLQ9H1B7 796 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 SIRPGQ9P1W8 387 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 ALG5Q9Y673 324 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 TTC34A8MYJ7 566 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 ITGA10O75578 1167 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 SMPD1P17405 629 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 VARS2Q5ST30 1063 aaKnown RBP17.57■□□□□ 0.4
COL5A3-201ENST00000264828 KIAA0930Q6ICG6 404 aaPredicted RBP17.57■□□□□ 0.4
COL5A3-201ENST00000264828 CHRDL2Q6WN34 429 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 ANKFN1Q8N957 763 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 MINDY2Q8NBR6 621 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 SLC38A3Q99624 504 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 STOX2Q9P2F5 926 aaPredicted RBP17.57■□□□□ 0.4
COL5A3-201ENST00000264828 ERVW-1Q9UQF0 538 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 DIRAS1O95057 198 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 RASGEF1BQ0VAM2 473 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 RAB12Q6IQ22 244 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 MAFBQ9Y5Q3 323 aaPredicted RBP17.57■□□□□ 0.4
COL5A3-201ENST00000264828 A0A0G2JPF8 293 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 PRORSD1PA6NEY8 169 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 HNRNPCL3B7ZW38 293 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 CAPN15O75808 1086 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 HNRNPCL4P0DMR1 293 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 ZNF8P17098 575 aaPredicted RBP17.57■□□□□ 0.4
COL5A3-201ENST00000264828 NFKBIDQ8NI38 313 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 CENPMQ9NSP4 180 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 LYARQ9NX58 379 aaKnown RBP17.57■□□□□ 0.4
COL5A3-201ENST00000264828 GDAP2Q9NXN4 497 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 LOC100130705A0A1B0GUX0 176 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 CCDC85CA6NKD9 419 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 UBXN7O94888 489 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 ANXA8P13928 327 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 VARSP26640 1264 aaKnown RBP17.57■□□□□ 0.4
COL5A3-201ENST00000264828 ZNF280BQ86YH2 543 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 ADAD1Q96M93 576 aaKnown RBP17.57■□□□□ 0.4
COL5A3-201ENST00000264828 COL20A1Q9P218 1284 aa17.57■□□□□ 0.4
COL5A3-201ENST00000264828 CLIC1O00299 241 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 MTX2O75431 263 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 CCKBRP32239 447 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 SLC6A9P48067 706 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 ARPC4P59998 168 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 SLC18A2Q05940 514 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 HNRNPDQ14103 355 aaKnown RBP17.56■□□□□ 0.4
COL5A3-201ENST00000264828 ZBED5Q49AG3 693 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 NAT8LQ8N9F0 302 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 SMURF2Q9HAU4 748 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 SIX2Q9NPC8 291 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 PCDHGB7Q9Y5F8 929 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 ZNF878C9JN71 531 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 VNN1O95497 513 aa17.56■□□□□ 0.4
COL5A3-201ENST00000264828 KLK1P06870 262 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms