RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 PCBD2Q9H0N5 130 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 DUSP15Q9H1R2 295 aaPredicted RBP22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 AIG1Q9NVV5 245 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 ICKQ9UPZ9 632 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 GPR45Q9Y5Y3 372 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 PSMD12O00232 456 aaPredicted RBP22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 C1GALT1C1LP0DN25 315 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 THRAP10827 490 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 TDGF1P13385 188 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 GPX3P22352 226 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 NEK2P51955 445 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 STX1BP61266 288 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 HMGCS1Q01581 520 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 EMX2Q04743 252 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 AP5B1Q2VPB7 878 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 TSSK4Q6SA08 328 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 NXPE4Q6UWF7 544 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 LAYNQ6UX15 382 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 TMEFF1Q8IYR6 380 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 FNDC5Q8NAU1 212 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 BTBD10Q9BSF8 475 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 EFCAB11Q9BUY7 163 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 SDR39U1Q9NRG7 319 aaPredicted RBP22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 TAS2R1Q9NYW7 299 aa22.11■■□□□ 1.13
SMARCB1-201ENST00000263121 LOC100653049A0A140TA62 436 aa22.1■■□□□ 1.13
SMARCB1-201ENST00000263121 CFAP73A6NFT4 308 aa22.1■■□□□ 1.13
SMARCB1-201ENST00000263121 NPIPB8E9PQR5 432 aa22.1■■□□□ 1.13
SMARCB1-201ENST00000263121 TLR4O00206 839 aa22.1■■□□□ 1.13
SMARCB1-201ENST00000263121 KRT34O76011 436 aa22.1■■□□□ 1.13
SMARCB1-201ENST00000263121 ACADVLP49748 655 aa22.1■■□□□ 1.13
SMARCB1-201ENST00000263121 MNAT1P51948 309 aa22.1■■□□□ 1.13
SMARCB1-201ENST00000263121 DIO3P55073 304 aa22.1■■□□□ 1.13
SMARCB1-201ENST00000263121 SNX32Q86XE0 403 aa22.1■■□□□ 1.13
SMARCB1-201ENST00000263121 BRINP2Q9C0B6 783 aa22.1■■□□□ 1.13
SMARCB1-201ENST00000263121 MIR1-1HGQ9H1L0 117 aa22.1■■□□□ 1.13
SMARCB1-201ENST00000263121 XKR8Q9H6D3 395 aa22.1■■□□□ 1.13
SMARCB1-201ENST00000263121 TAAR2Q9P1P5 351 aa22.1■■□□□ 1.13
SMARCB1-201ENST00000263121 TAC3Q9UHF0 121 aa22.1■■□□□ 1.13
SMARCB1-201ENST00000263121 PCDHGA11Q9Y5H2 935 aa22.1■■□□□ 1.13
SMARCB1-201ENST00000263121 B2RBV5 119 aa22.09■■□□□ 1.13
SMARCB1-201ENST00000263121 KDM1AO60341 852 aa22.09■■□□□ 1.13
SMARCB1-201ENST00000263121 CELA2BP08218 269 aaPredicted RBP22.09■■□□□ 1.13
SMARCB1-201ENST00000263121 PRPH2P23942 346 aa22.09■■□□□ 1.13
SMARCB1-201ENST00000263121 SLC19A1P41440 591 aa22.09■■□□□ 1.13
SMARCB1-201ENST00000263121 IMPG1Q17R60 797 aa22.09■■□□□ 1.13
SMARCB1-201ENST00000263121 KIF19Q2TAC6 998 aa22.09■■□□□ 1.13
SMARCB1-201ENST00000263121 IYDQ6PHW0 289 aa22.09■■□□□ 1.13
SMARCB1-201ENST00000263121 MIER2Q8N344 545 aa22.09■■□□□ 1.13
SMARCB1-201ENST00000263121 FBXO27Q8NI29 283 aa22.09■■□□□ 1.13
SMARCB1-201ENST00000263121 GEMIN8Q9NWZ8 242 aaKnown RBP22.09■■□□□ 1.13
SMARCB1-201ENST00000263121 RSL1D1O76021 490 aaKnown RBP22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 CSF2P04141 144 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 CDH1P12830 882 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 CTSEP14091 401 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 JUNDP17535 347 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 FNTBP49356 437 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 KCNJ2P63252 427 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 CSTF3Q12996 717 aaKnown RBP22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 GRIK2Q13002 908 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 CYLC2Q14093 348 aaPredicted RBP22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 SLBPQ14493 270 aaKnown RBP eCLIP22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 RFTN2Q52LD8 501 aaPredicted RBP22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 AGKQ53H12 422 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 MED27Q6P2C8 311 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 WDR5BQ86VZ2 330 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 C17orf64Q86WR6 236 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 LAS2Q8IYD9 372 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 RBM15BQ8NDT2 890 aaKnown RBP22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 OR7G3Q8NG95 312 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 SH3KBP1Q96B97 665 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 CXorf40BQ96DE9 158 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 C1orf50Q9BV19 199 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 LRRC61Q9BV99 259 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 ACAT2Q9BWD1 397 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 C1orf21Q9H246 121 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 LRTM1Q9HBL6 345 aa22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 APOBEC3BQ9UH17 382 aaKnown RBP22.08■■□□□ 1.13
SMARCB1-201ENST00000263121 NME1P15531 152 aaKnown RBP22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 NQO1P15559 274 aaKnown RBP22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 PSMB5P28074 263 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 LAPTM5Q13571 262 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 PDCD4Q53EL6 469 aaKnown RBP22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 PAGE2BQ5JRK9 111 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 PAOXQ6QHF9 649 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 GK5Q6ZS86 529 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 ZFAND4Q86XD8 727 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 FUNDC1Q8IVP5 155 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 OR9I1Q8NGQ6 314 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 RTKNQ9BST9 563 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 TBC1D10AQ9BXI6 508 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 PELI2Q9HAT8 420 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 C1orf109Q9NX04 203 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 PIPSLA2A3N6 862 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 GYG2O15488 501 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 PRICKLE3O43900 615 aaPredicted RBP22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 HSD3B1P14060 373 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 SLC2A4P14672 509 aa22.07■■□□□ 1.12
SMARCB1-201ENST00000263121 HSD3B2P26439 372 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms