RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 SLC22A14Q9Y267 594 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 PCNX2A6NKB5 2137 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 PRR19A6NJB7 356 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 CACNB4O00305 520 aaPredicted RBP16.91■□□□□ 0.3
SRSF1-201ENST00000258962 UBDO15205 165 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 KRT16P08779 473 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 ACP5P13686 325 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 HTR1BP28222 390 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 EPHA8P29322 1005 aaPredicted RBP16.91■□□□□ 0.3
SRSF1-201ENST00000258962 ADSLP30566 484 aaPredicted RBP16.91■□□□□ 0.3
SRSF1-201ENST00000258962 PYCR3Q53H96 274 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 TPRG1LQ5T0D9 272 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 DBX2Q6ZNG2 339 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 CHST15Q7LFX5 561 aaPredicted RBP16.91■□□□□ 0.3
SRSF1-201ENST00000258962 PARGQ86W56 976 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 GATAD2AQ86YP4 633 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 HOMEZQ8IX15 550 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 OR56A3Q8NH54 315 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 SAP25Q8TEE9 199 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 ATL1Q8WXF7 558 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 TUBGCP3Q96CW5 907 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 SCARF2Q96GP6 870 aaPredicted RBP16.91■□□□□ 0.3
SRSF1-201ENST00000258962 BTBD10Q9BSF8 475 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 TBC1D10AQ9BXI6 508 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 GPR27Q9NS67 375 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 INTS7Q9NVH2 962 aaKnown RBP16.91■□□□□ 0.3
SRSF1-201ENST00000258962 TAS2R1Q9NYW7 299 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 SUFUQ9UMX1 484 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 PSMD13Q9UNM6 376 aa16.91■□□□□ 0.3
SRSF1-201ENST00000258962 SPTBN2O15020 2390 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 KCNE1BA0A087WTH5 132 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 KLHL33A6NCF5 533 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 B2RBV5 119 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 VPS4BO75351 444 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 COX4I1P13073 169 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 HMOX2P30519 316 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 HNRNPKP61978 463 aaKnown RBP eCLIP16.9■□□□□ 0.3
SRSF1-201ENST00000258962 BNIP3Q12983 259 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 NAE1Q13564 534 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 FZD2Q14332 565 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 SQLEQ14534 574 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 NFATC4Q14934 902 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 ABRAXAS2Q15018 415 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 SHBQ15464 509 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 RNF165Q6ZSG1 346 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 Q6ZSR9 355 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 THOC6Q86W42 341 aaKnown RBP16.9■□□□□ 0.3
SRSF1-201ENST00000258962 PPFIBP2Q8ND30 876 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 ZNF480Q8WV37 535 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 CAMK1GQ96NX5 476 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 OR4K3Q96R72 315 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 CDC6Q99741 560 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 ACTR8Q9H981 624 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.9■□□□□ 0.32e-6■□□□□ 8.9
SRSF1-201ENST00000258962 PLEKHM1Q9Y4G2 1056 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 TMEM131Q92545 1883 aa16.9■□□□□ 0.3
SRSF1-201ENST00000258962 FFAR3O14843 346 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 GPR42O15529 346 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 CLDN9O95484 217 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 EZRP15311 586 aaKnown RBP16.89■□□□□ 0.29
SRSF1-201ENST00000258962 LBPP18428 481 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 ATP4BP51164 291 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 TRIP6Q15654 476 aaKnown RBP16.89■□□□□ 0.29
SRSF1-201ENST00000258962 GGTA1PQ4G0N0 100 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 ZNF542PQ5EBM4 170 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 OGFOD2Q6N063 350 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 SNX32Q86XE0 403 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 GALNT13Q8IUC8 556 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 ARHGAP24Q8N264 748 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 L3MBTL4Q8NA19 623 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 RBM15BQ8NDT2 890 aaKnown RBP16.89■□□□□ 0.29
SRSF1-201ENST00000258962 OR5AR1Q8NGP9 310 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 OR9A1PQ8NGU1 263 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 CMTM5Q96DZ9 223 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 HBEGFQ99075 208 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 CCT7Q99832 543 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 CADM1Q9BY67 442 aaKnown RBP16.89■□□□□ 0.29
SRSF1-201ENST00000258962 SLC29A3Q9BZD2 475 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 SLC40A1Q9NP59 571 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 KLQ9UEF7 1012 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 PCOLCE2Q9UKZ9 415 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 KCNK6Q9Y257 313 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 ASF1AQ9Y294 204 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 WDR37Q9Y2I8 494 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 CCL27Q9Y4X3 112 aa16.89■□□□□ 0.29
SRSF1-201ENST00000258962 LOC100653049A0A140TA62 436 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 PRSS38A1L453 326 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 MANBAO00462 879 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 SDC3O75056 442 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 PEX11AO75192 247 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 KRT34O76011 436 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 CSF2P04141 144 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 CPOXP36551 454 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 GNPDA1P46926 289 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 SIM1P81133 766 aaPredicted RBP16.88■□□□□ 0.29
SRSF1-201ENST00000258962 HERC3Q15034 1050 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 ZRSR2Q15696 482 aaKnown RBP16.88■□□□□ 0.29
SRSF1-201ENST00000258962 CAPRIN2Q6IMN6 1127 aaKnown RBP16.88■□□□□ 0.29
SRSF1-201ENST00000258962 LRRC56Q8IYG6 542 aaPredicted RBP16.88■□□□□ 0.29
SRSF1-201ENST00000258962 SFRP1Q8N474 314 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms