RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 DPM1O60762 260 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 C9P02748 559 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 GGT2P36268 569 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 NUDT1P36639 197 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 ITGA1P56199 1179 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 TEKQ02763 1124 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 VGLL4Q14135 290 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 TRIM71Q2Q1W2 868 aaKnown RBP11.19□□□□□ -0.62
TROAP-201ENST00000257909 UBXN11Q5T124 520 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 ZNF367Q7RTV3 350 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 SERPINA11Q86U17 422 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 STX19Q8N4C7 294 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 KRTCAP2Q8N6L1 136 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 C9orf43Q8TAL5 461 aaPredicted RBP11.19□□□□□ -0.62
TROAP-201ENST00000257909 CD200R1Q8TD46 325 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 EGLN2Q96KS0 407 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 TRNT1Q96Q11 434 aaKnown RBP11.19□□□□□ -0.62
TROAP-201ENST00000257909 IPPKQ9H8X2 491 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 SLC6A13Q9NSD5 602 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 TMEM248Q9NWD8 314 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 PTGESO14684 152 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 AOC2O75106 756 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 PXNP49023 591 aaPredicted RBP11.19□□□□□ -0.62
TROAP-201ENST00000257909 ZNF140P52738 457 aaPredicted RBP11.19□□□□□ -0.62
TROAP-201ENST00000257909 VLDLRP98155 873 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 IL10RBQ08334 325 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 CSTF3Q12996 717 aaKnown RBP11.19□□□□□ -0.62
TROAP-201ENST00000257909 TAPT1Q6NXT6 567 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 BPHLQ86WA6 291 aaPredicted RBP11.19□□□□□ -0.62
TROAP-201ENST00000257909 KRT73Q86Y46 540 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 KCNS3Q9BQ31 491 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 ZYG11BQ9C0D3 744 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 MKRN2Q9H000 416 aaKnown RBP11.19□□□□□ -0.62
TROAP-201ENST00000257909 LRTM1Q9HBL6 345 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 SMURF1Q9HCE7 757 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 RANGRFQ9HD47 186 aaPredicted RBP11.19□□□□□ -0.62
TROAP-201ENST00000257909 SERHLQ9NQF3 203 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 AASDHPPTQ9NRN7 309 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 UBA2Q9UBT2 640 aaPredicted RBP11.19□□□□□ -0.62
TROAP-201ENST00000257909 ZMYM5Q9UJ78 669 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 DOCK4Q8N1I0 1966 aa11.19□□□□□ -0.62
TROAP-201ENST00000257909 NIPSNAP2O75323 286 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 WDR47O94967 919 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 DIRAS1O95057 198 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 PIRTP0C851 137 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 IGFBP6P24592 240 aaPredicted RBP11.18□□□□□ -0.62
TROAP-201ENST00000257909 ERP29P30040 261 aaKnown RBP11.18□□□□□ -0.62
TROAP-201ENST00000257909 S100A3P33764 101 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 HTR2BP41595 481 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 TTPAP49638 278 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 GPLD1P80108 840 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 SLAMF1Q13291 335 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 Q5BKY6 102 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 C10orf62Q5T681 223 aaPredicted RBP11.18□□□□□ -0.62
TROAP-201ENST00000257909 TRIM46Q7Z4K8 759 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 ADAMTSL2Q86TH1 951 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 LIX1LQ8IVB5 337 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 FAM109AQ8N4B1 249 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 KCNJ9Q92806 393 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 CDCA5Q96FF9 252 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 SERPINB11Q96P15 392 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 EPYCQ99645 322 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 SLC22A4Q9H015 551 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 TNKS2Q9H2K2 1166 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 RETREG1Q9H6L5 497 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 PRDM5Q9NQX1 630 aaPredicted RBP11.18□□□□□ -0.62
TROAP-201ENST00000257909 TOR4AQ9NXH8 423 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 SNX8Q9Y5X2 465 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 COMMD10Q9Y6G5 202 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 E5RI56 91 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 ARHGEF9O43307 516 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 PTHP01270 115 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 VIPP01282 170 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 HOXB9P17482 250 aaPredicted RBP11.18□□□□□ -0.62
TROAP-201ENST00000257909 MLLT3P42568 568 aaPredicted RBP11.18□□□□□ -0.62
TROAP-201ENST00000257909 OR3A3P47888 321 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 CLCN4P51793 760 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 SCN1BQ07699 218 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 IRF3Q14653 427 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 USP39Q53GS9 565 aaKnown RBP11.18□□□□□ -0.62
TROAP-201ENST00000257909 GNASQ5JWF2 1037 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 PIK3R6Q5UE93 754 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 ERICH5Q6P6B1 374 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 XKRXQ6PP77 449 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 C19orf48Q6RUI8 117 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 ZNF605Q86T29 641 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 RNF130Q86XS8 419 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 FAM9CQ8IZT9 166 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 SCAMP5Q8TAC9 235 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 RUBCNLQ9H714 662 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 SIRT5Q9NXA8 310 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 SNX7Q9UNH6 387 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 KLHL20Q9Y2M5 609 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 PLXNB2O15031 1838 aa11.18□□□□□ -0.62
TROAP-201ENST00000257909 CCDC182A6NF36 153 aa11.17□□□□□ -0.62
TROAP-201ENST00000257909 EFCAB10A6NFE3 127 aa11.17□□□□□ -0.62
TROAP-201ENST00000257909 MOXD2PA6NHM9 499 aa11.17□□□□□ -0.62
TROAP-201ENST00000257909 ULK1O75385 1050 aa11.17□□□□□ -0.62
TROAP-201ENST00000257909 STSP08842 583 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms