RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 PSMB5P28074 263 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 DCTP40126 519 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 GRIA3P42263 894 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 TTPAP49638 278 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 PRAMEP78395 509 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 Q0VFX4 171 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 KIF5AQ12840 1032 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 GRM7Q14831 915 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 TMED2Q15363 201 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 CCSMST1Q4G0I0 132 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 FASTKD1Q53R41 847 aaKnown RBP9.86□□□□□ -0.83
VPS50-201ENST00000251739 ZC3H12BQ5HYM0 836 aaKnown RBP9.86□□□□□ -0.83
VPS50-201ENST00000251739 B3GNTL1Q67FW5 361 aaPredicted RBP9.86□□□□□ -0.83
VPS50-201ENST00000251739 DCHS2Q6V1P9 2916 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 PPP1R21Q6ZMI0 780 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 RNF44Q7L0R7 432 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 PRUNE1Q86TP1 453 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 TAX1BP1Q86VP1 789 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 SLC13A5Q86YT5 568 aaPredicted RBP9.86□□□□□ -0.83
VPS50-201ENST00000251739 KRT222Q8N1A0 295 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 ZADH2Q8N4Q0 377 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 ST6GALNAC3Q8NDV1 305 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 OR11G2Q8NGC1 345 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 OR2A1Q8NGT9 310 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 OR6P1Q8NGX9 317 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 COG1Q8WTW3 980 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 ZUFSPQ96AP4 578 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 BAG1Q99933 345 aaPredicted RBP9.86□□□□□ -0.83
VPS50-201ENST00000251739 TRIM56Q9BRZ2 755 aaKnown RBP9.86□□□□□ -0.83
VPS50-201ENST00000251739 TSSK1BQ9BXA7 367 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 RAB11FIP5Q9BXF6 653 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 EIF2B3Q9NR50 452 aaKnown RBP9.86□□□□□ -0.83
VPS50-201ENST00000251739 RAB6BQ9NRW1 208 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 CATSPERZQ9NTU4 200 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 INTS7Q9NVH2 962 aaKnown RBP9.86□□□□□ -0.83
VPS50-201ENST00000251739 SLC5A6Q9Y289 635 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 COPG1Q9Y678 874 aaKnown RBP9.86□□□□□ -0.83
VPS50-201ENST00000251739 NFS1Q9Y697 457 aa9.86□□□□□ -0.83
VPS50-201ENST00000251739 PDZD2O15018 2839 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 OR2A25A4D2G3 310 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 KRT87PA6NCN2 255 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 CD3EAPO15446 510 aaKnown RBP9.85□□□□□ -0.83
VPS50-201ENST00000251739 SRPX2O60687 465 aaPredicted RBP9.85□□□□□ -0.83
VPS50-201ENST00000251739 C1orf105O95561 183 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 GAS8O95995 478 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 APRTP07741 180 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 ERGP11308 486 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 PIM1P11309 404 aaPredicted RBP9.85□□□□□ -0.83
VPS50-201ENST00000251739 ETS1P14921 441 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 ALAS2P22557 587 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 ITGA3P26006 1051 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 COL8A1P27658 744 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 PPARGP37231 505 aaPredicted RBP9.85□□□□□ -0.83
VPS50-201ENST00000251739 BDKRB1P46663 353 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 HIF1AQ16665 826 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 TUBB8Q3ZCM7 444 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 GLIPR1L2Q4G1C9 344 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 PCID2Q5JVF3 399 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 CTSL3PQ5NE16 218 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 ZNF787Q6DD87 383 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 FRMPD2BQ6IN97 320 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 KCNMB4Q86W47 210 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 LRRC6Q86X45 466 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 C2orf73Q8N5S3 287 aaPredicted RBP9.85□□□□□ -0.83
VPS50-201ENST00000251739 RNF10Q8N5U6 811 aaKnown RBP9.85□□□□□ -0.83
VPS50-201ENST00000251739 PPHLN1Q8NEY8 458 aaKnown RBP9.85□□□□□ -0.83
VPS50-201ENST00000251739 OR2L3Q8NG85 312 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 CFAP61Q8NHU2 1237 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 C1orf54Q8WWF1 131 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 LPGAT1Q92604 370 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 RAD51AP1Q96B01 352 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 C10orf90Q96M02 699 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 C5orf34Q96MH7 638 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 BIRC8Q96P09 236 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 SLX1AQ9BQ83 275 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 SELENOSQ9BQE4 189 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 LHPPQ9H008 270 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 RBSNQ9H1K0 784 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 SYNPO2LQ9H987 977 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 CHRAC1Q9NRG0 131 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 SEMA3GQ9NS98 782 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 IRAK4Q9NWZ3 460 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 IL1RAPL1Q9NZN1 696 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 PAK5Q9P286 719 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 CDC23Q9UJX2 597 aa9.85□□□□□ -0.83
VPS50-201ENST00000251739 RUVBL2Q9Y230 463 aaKnown RBP9.85□□□□□ -0.83
VPS50-201ENST00000251739 ANKRD17O75179 2603 aaKnown RBP9.85□□□□□ -0.83
VPS50-201ENST00000251739 POLQO75417 2590 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 LOC105369274A0A096LPK9 316 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 LOC102723532A0A0G2JNH3 316 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 E7EVH7 732 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 MATN4O95460 622 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 SNRPBP14678 240 aaKnown RBP9.84□□□□□ -0.83
VPS50-201ENST00000251739 ATP5DP30049 168 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 RPL22P35268 128 aaKnown RBP9.84□□□□□ -0.83
VPS50-201ENST00000251739 OR1D4P47884 311 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 YBX1P67809 324 aaKnown RBP9.84□□□□□ -0.83
VPS50-201ENST00000251739 CRADDP78560 199 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 SF1Q15637 639 aaKnown RBP9.84□□□□□ -0.83
VPS50-201ENST00000251739 TYSND1Q2T9J0 566 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms