RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 GSTM4Q03013 218 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 VAC14Q08AM6 782 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 MTAPQ13126 283 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 SF1Q15637 639 aaKnown RBP18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 UGT8Q16880 541 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZNF773Q6PK81 442 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 TMEM26Q6ZUK4 368 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 C8orf59Q8N0T1 100 aaPredicted RBP18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 WDR20Q8TBZ3 569 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 SGCDQ92629 289 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 PYURFQ96I23 114 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 MTERF1Q99551 399 aaKnown RBP18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 RBM4BQ9BQ04 359 aaKnown RBP18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 DCUN1D5Q9BTE7 237 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 RBM4Q9BWF3 364 aaKnown RBP18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 H3BMQ9 156 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 TSPAN6O43657 245 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 AP2A2O94973 939 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 CPNE6O95741 557 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 FTH1P02794 183 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 IL1RNP18510 177 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 EEF1B2P24534 225 aaKnown RBP18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 CTSCP53634 463 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 EPHA5P54756 1037 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 WNT3P56703 355 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 KCNAB2Q13303 367 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 LRRC26Q2I0M4 334 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 XKR6Q5GH73 641 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 LIPJQ5W064 366 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 ARHGAP22Q7Z5H3 698 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 THOC6Q86W42 341 aaKnown RBP18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 ADHFE1Q8IWW8 467 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 TRAM1L1Q8N609 369 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 PNPT1Q8TCS8 783 aaKnown RBP18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 CSGALNACT1Q8TDX6 532 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 COG8Q96MW5 612 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 DOK1Q99704 481 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 VNN3Q9NY84 501 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 WNT6Q9Y6F9 365 aa18.94■□□□□ 0.62
CDC42EP1-201ENST00000249014 SCN2BO60939 215 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 PSIP1O75475 530 aaKnown RBP18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 POLR2EP19388 210 aaKnown RBP18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 PRPS1L1P21108 318 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 CRHBPP24387 322 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 PREPP48147 710 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 SPIDRQ14159 915 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 DMC1Q14565 340 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 MYBPC3Q14896 1274 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 TTC23Q5W5X9 447 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 ADNP2Q6IQ32 1131 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 FKBP9P1Q75LS8 142 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 KIAA0907Q7Z7F0 614 aaPredicted RBP18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 RBM23Q86U06 439 aaKnown RBP18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 SYT12Q8IV01 421 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 RASGEF1AQ8N9B8 481 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 OR5K1Q8NHB7 308 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 NELL1Q92832 810 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 HS6ST1O60243 411 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 RECQL5O94762 991 aaPredicted RBP18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 WEE1P30291 646 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 TTKP33981 857 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 EMP3P54852 163 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 DDX39BQ13838 428 aaKnown RBP18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 DOC2AQ14183 400 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZNF77Q15935 545 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 R3HCC1LQ7Z5L2 792 aaKnown RBP18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 RAVER1Q8IY67 606 aaKnown RBP18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 EID3Q8N140 333 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZNF420Q8TAQ5 688 aaPredicted RBP18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 BTN2A2Q8WVV5 523 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 OR4K3Q96R72 315 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 PANX1Q96RD7 426 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZSCAN5AQ9BUG6 496 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 ADNPQ9H2P0 1102 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 VPS29Q9UBQ0 182 aa18.93■□□□□ 0.62
CDC42EP1-201ENST00000249014 TSPAN11A1L157 253 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 FPGTO14772 594 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 YY2O15391 372 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 UGDHO60701 494 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 EFCAB14O75071 495 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 E2F6O75461 281 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 RHOP08100 348 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 MAP4P27816 1152 aaKnown RBP18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 STT3AP46977 705 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 CSTF3Q12996 717 aaKnown RBP18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 KCNC3Q14003 757 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 MEP1AQ16819 746 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 DUOXA1Q1HG43 343 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 CTU2Q2VPK5 515 aaKnown RBP18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 PLPP4Q5VZY2 271 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 DHRS4L2Q6PKH6 230 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 MSANTD1Q6ZTZ1 278 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 SERPINA11Q86U17 422 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZNF366Q8N895 744 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 CHDHQ8NE62 594 aaPredicted RBP18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 MED8Q96G25 268 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZSWIM3Q96MP5 696 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 AASDHPPTQ9NRN7 309 aa18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 SPATA6Q9NWH7 488 aaPredicted RBP18.92■□□□□ 0.62
CDC42EP1-201ENST00000249014 ETAA1Q9NY74 926 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms