RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 OR6C4Q8NGE1 309 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 SCRN2Q96FV2 425 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 SLC30A2Q9BRI3 323 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 QPCTLQ9NXS2 382 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 CXCL11O14625 94 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 CREB1P16220 341 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 HJURPQ8NCD3 748 aaPredicted RBP10.87□□□□□ -0.67
MSH6-201ENST00000234420 IL22Q9GZX6 179 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 TVP23BQ9NYZ1 205 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 CA5BQ9Y2D0 317 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 C2orf92A0A1B0GVN3 265 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 OR6C74A6NCV1 312 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 BBIP1A8MTZ0 92 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 TPPPO94811 219 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 SELPP16109 830 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 ZNF20P17024 532 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 GLRA2P23416 452 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 PGAM4Q8N0Y7 254 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 METTL4Q8N3J2 472 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 SLC43A3Q8NBI5 491 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 OR4K17Q8NGC6 315 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 LGR4Q9BXB1 951 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 RANBP3Q9H6Z4 567 aaPredicted RBP10.87□□□□□ -0.67
MSH6-201ENST00000234420 TRHDEQ9UKU6 1024 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 CDC42BPBQ9Y5S2 1711 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 PLA2R1Q13018 1463 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 POU2F2P09086 479 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 ZNF823P16415 610 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 PTPN2P17706 415 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 IDH3GP51553 393 aaPredicted RBP10.86□□□□□ -0.67
MSH6-201ENST00000234420 E2F1Q01094 437 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 PRPF38BQ5VTL8 546 aaKnown RBP10.86□□□□□ -0.67
MSH6-201ENST00000234420 TAPT1Q6NXT6 567 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 ZNF550Q7Z398 422 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 WDSUB1Q8N9V3 476 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 PSD4Q8NDX1 1056 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 SPOCK2Q92563 424 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 FCGR1BQ92637 280 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 VPS25Q9BRG1 176 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 CENPMQ9NSP4 180 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 POT1Q9NUX5 634 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 PPP4R1LQ9P1A2 415 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 COPZ2Q9P299 210 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 LCHNA4D1U4 455 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 F8W036 122 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 PROM1O43490 865 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 CD79BP40259 229 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 APLP1P51693 650 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 PLA2G16P53816 162 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 BLOC1S1P78537 153 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 NAPRTQ6XQN6 538 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 CCDC74AQ96AQ1 378 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 CCDC74BQ96LY2 380 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 KLHL15Q96M94 604 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 CADM1Q9BY67 442 aaKnown RBP10.86□□□□□ -0.67
MSH6-201ENST00000234420 IL1RAPQ9NPH3 570 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 FCF1Q9Y324 198 aaKnown RBP10.86□□□□□ -0.67
MSH6-201ENST00000234420 MED14O60244 1454 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 DNMT1P26358 1616 aaKnown RBP10.86□□□□□ -0.67
MSH6-201ENST00000234420 H0YGN5 161 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 CCR10P46092 362 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 RNF4P78317 190 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 PDGFRLQ15198 375 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 ZNF542PQ5EBM4 170 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 ANXA8L1Q5VT79 327 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 ELP2Q6IA86 826 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 C17orf64Q86WR6 236 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 SMG8Q8ND04 991 aaKnown RBP10.86□□□□□ -0.67
MSH6-201ENST00000234420 SPATA22Q8NHS9 363 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 FRZBQ92765 325 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 TSSK3Q96PN8 268 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 RAD9AQ99638 391 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 NXF3Q9H4D5 531 aaKnown RBP10.86□□□□□ -0.67
MSH6-201ENST00000234420 CTPS2Q9NRF8 586 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 SNX15Q9NRS6 342 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 PCDHGB5Q9Y5G0 923 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 PRMT5O14744 637 aaPredicted RBP10.86□□□□□ -0.67
MSH6-201ENST00000234420 CHADO15335 359 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 MPPED1O15442 326 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 KAT7O95251 611 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 TRIM28Q13263 835 aaKnown RBP10.86□□□□□ -0.67
MSH6-201ENST00000234420 MOXD1Q6UVY6 613 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 ZFPM1Q8IX07 1006 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 PPCDCQ96CD2 204 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 SH2B3Q9UQQ2 575 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 ANKRD34BA5PLL1 514 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 SNAP29O95721 258 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 TSHRP16473 764 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 FXYD6P3P58550 94 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 C2orf80Q0P641 193 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 MOGQ16653 247 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 SLC2A7Q6PXP3 512 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 DPY19L3Q6ZPD9 716 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 SH3RF1Q7Z6J0 888 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 OR8S1Q8NH09 359 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 LENG9Q96B70 501 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 POPDC2Q9HBU9 364 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 RFPL1O75677 317 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 XRCC1P18887 633 aaPredicted RBP10.86□□□□□ -0.67
MSH6-201ENST00000234420 AFF3P51826 1226 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms