RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 RASAL1O95294 804 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 DLGAP3O95886 979 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 POU2F1P14859 743 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 HMGA1P17096 107 aaKnown RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 RPS3P23396 243 aaKnown RBP eCLIP9.5□□□□□ -0.89
CRX-201ENST00000221996 DDX6P26196 483 aaKnown RBP eCLIP9.5□□□□□ -0.89
CRX-201ENST00000221996 NTHL1P78549 312 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 TRAF3Q13114 568 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 C1DQ13901 141 aaKnown RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 PERM1Q5SV97 790 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 OR2T5Q6IEZ7 315 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 GPR153Q6NV75 609 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 AMZ2Q86W34 360 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 OR2T29Q8NH02 315 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 ZFP28Q8NHY6 868 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 VANGL1Q8TAA9 524 aaPredicted RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 MYLIPQ8WY64 445 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 TRIB3Q96RU7 358 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 MCMBPQ9BTE3 642 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 EFCAB11Q9BUY7 163 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 OR51B5Q9H339 312 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 CCNB1IP1Q9NPC3 277 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 TLR9Q9NR96 1032 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 SPACA6W5XKT8 324 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 E2F3O00716 465 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 ACOT8O14734 319 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 RGS10O43665 173 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 NADKO95544 446 aaPredicted RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 IGLV3-27P01718 113 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 FMO3P31513 532 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 CTSKP43235 329 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 IST1P53990 364 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 PNLIPRP1P54315 467 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 DEFA1P59665 94 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 DEFA3P59666 94 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 RPS13P62277 151 aaKnown RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 TUBA4AP68366 448 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 SP140Q13342 867 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 MACC1Q6ZN28 852 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 ADGRG5Q8IZF4 528 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 DTWD1Q8N5C7 304 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 OR5AK3PQ8NH89 298 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 PIH1D2Q8WWB5 315 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 GLYATL1Q969I3 302 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 WBP2Q969T9 261 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 ZHX1-C8orf76Q96EF9 292 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 ZNF419Q96HQ0 510 aaPredicted RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 BIRC8Q96P09 236 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 PHPT1Q9NRX4 125 aaPredicted RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 TNS1Q9HBL0 1735 aaKnown RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 TBC1D3DA0A087WVF3 549 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 TBC1D3IA0A087WXS9 549 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 TBC1D3EA0A087X179 549 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 TBC1D3KA0A087X1G2 549 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 A0A0G2JN53 185 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 TBC1D3FA6NER0 549 aaPredicted RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 TBC1D3LB9A6J9 549 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 H0YJX3 145 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 GUCY1B2O75343 617 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 PRLP01236 227 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 TBC1D3HP0C7X1 549 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 DBTP11182 482 aaKnown RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 VEGFBP49765 207 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 CDK9P50750 372 aaKnown RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 SKIV2LQ15477 1246 aaKnown RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 MEP1AQ16819 746 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 DGKKQ5KSL6 1271 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 TBC1D3GQ6DHY5 549 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 TBC1D3CQ6IPX1 549 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 FAM124AQ86V42 546 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 ERI1Q8IV48 349 aaKnown RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 TBC1D3Q8IZP1 549 aaPredicted RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 WFDC5Q8TCV5 224 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 PROKR1Q8TCW9 393 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 GIPC3Q8TF64 312 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 BCL7CQ8WUZ0 217 aaPredicted RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 MYDGFQ969H8 173 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 ZNF514Q96K75 400 aaPredicted RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 SLC46A2Q9BY10 475 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 KCNH6Q9H252 994 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 RHBGQ9H310 441 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 AMBNQ9NP70 447 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 ITM2CQ9NQX7 267 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 VAPAQ9P0L0 249 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 MAP10Q9P2G4 905 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 ZNF282Q9UDV7 671 aaPredicted RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 SRCAPQ6ZRS2 3230 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 OR1F1O43749 312 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 CTSAP10619 480 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 MYBPC1Q00872 1141 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 ACVR1Q04771 509 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 HSPB3Q12988 150 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 TEAD4Q15561 434 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 GPAT3Q53EU6 434 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 ZNF805Q5CZA5 627 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 GOLM1Q8NBJ4 401 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 OR4K1Q8NGD4 311 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 TUBB1Q9H4B7 451 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 CWH43Q9H720 699 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms