RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ZCCHC8Q6NZY4 707 aaKnown RBP16.8■□□□□ 0.28
USB1-201ENST00000219281 METTL2BQ6P1Q9 378 aaKnown RBP16.8■□□□□ 0.28
USB1-201ENST00000219281 ZNF783Q6ZMS7 281 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 APIPQ96GX9 242 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 ZNF641Q96N77 438 aaPredicted RBP16.8■□□□□ 0.28
USB1-201ENST00000219281 CLSTN3Q9BQT9 956 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 HTATIP2Q9BUP3 242 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 GABARAPL1Q9H0R8 117 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 DUSP21Q9H596 190 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 THG1LQ9NWX6 298 aaKnown RBP16.8■□□□□ 0.28
USB1-201ENST00000219281 SCN3BQ9NY72 215 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 OR51B4Q9Y5P0 310 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 FADS2O95864 444 aaKnown RBP16.79■□□□□ 0.28
USB1-201ENST00000219281 MT-ND2P03891 347 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 HOXB6P17509 224 aaKnown RBP16.79■□□□□ 0.28
USB1-201ENST00000219281 TUFMP49411 452 aaKnown RBP16.79■□□□□ 0.28
USB1-201ENST00000219281 IFITM3Q01628 133 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 PLD1Q13393 1074 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 ARHGEF6Q15052 776 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 SMN1Q16637 294 aaKnown RBP16.79■□□□□ 0.28
USB1-201ENST00000219281 CDKN3Q16667 212 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 DGUOKQ16854 277 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 TTLL9Q3SXZ7 439 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 LYPLAL1Q5VWZ2 237 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 KDM4DQ6B0I6 523 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 ADCK1Q86TW2 530 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 P2RY8Q86VZ1 359 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 ZNF540Q8NDQ6 660 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 S100ZQ8WXG8 99 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 POP5Q969H6 163 aaKnown RBP16.79■□□□□ 0.28
USB1-201ENST00000219281 TM9SF3Q9HD45 589 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 IL1RAPQ9NPH3 570 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 AASDHPPTQ9NRN7 309 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 ARHGEF15O94989 841 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 SPAM1P38567 509 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 KEAP1Q14145 624 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 CLCA4Q14CN2 919 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 ZXDCQ2QGD7 858 aaPredicted RBP16.79■□□□□ 0.28
USB1-201ENST00000219281 APCDD1Q8J025 514 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 NXPE1Q8N323 547 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 APOLD1Q96LR9 279 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 BCL7BQ9BQE9 202 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 ATP13A3Q9H7F0 1226 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 PCDH12Q9NPG4 1184 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 NECTIN3Q9NQS3 549 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 PDP1Q9P0J1 537 aaPredicted RBP16.79■□□□□ 0.28
USB1-201ENST00000219281 OGDHLQ9ULD0 1010 aa16.79■□□□□ 0.28
USB1-201ENST00000219281 EVPLLA8MZ36 301 aa16.78■□□□□ 0.28
USB1-201ENST00000219281 JRKO75564 520 aa16.78■□□□□ 0.28
USB1-201ENST00000219281 CDH18Q13634 790 aa16.78■□□□□ 0.28
USB1-201ENST00000219281 INAQ16352 499 aa16.78■□□□□ 0.28
USB1-201ENST00000219281 TAF12Q16514 161 aa16.78■□□□□ 0.28
USB1-201ENST00000219281 VTCN1Q7Z7D3 282 aa16.78■□□□□ 0.28
USB1-201ENST00000219281 TSPAN33Q86UF1 283 aa16.78■□□□□ 0.28
USB1-201ENST00000219281 TTC29Q8NA56 475 aaPredicted RBP16.78■□□□□ 0.28
USB1-201ENST00000219281 TESCQ96BS2 214 aa16.78■□□□□ 0.28
USB1-201ENST00000219281 TBC1D20Q96BZ9 403 aa16.78■□□□□ 0.28
USB1-201ENST00000219281 ALG14Q96F25 216 aa16.78■□□□□ 0.28
USB1-201ENST00000219281 IGSF21Q96ID5 467 aa16.78■□□□□ 0.28
USB1-201ENST00000219281 KCTD5Q9NXV2 234 aa16.78■□□□□ 0.28
USB1-201ENST00000219281 SNX6Q9UNH7 406 aa16.78■□□□□ 0.28
USB1-201ENST00000219281 PMF1-BGLAPU3KQ54 211 aa16.78■□□□□ 0.28
USB1-201ENST00000219281 FABP3P05413 133 aa16.77■□□□□ 0.28
USB1-201ENST00000219281 EPHA2P29317 976 aa16.77■□□□□ 0.28
USB1-201ENST00000219281 DNAJA1P31689 397 aaKnown RBP16.77■□□□□ 0.28
USB1-201ENST00000219281 NCS1P62166 190 aa16.77■□□□□ 0.28
USB1-201ENST00000219281 SYT6Q5T7P8 510 aaPredicted RBP16.77■□□□□ 0.28
USB1-201ENST00000219281 UBE2R2Q712K3 238 aaPredicted RBP16.77■□□□□ 0.28
USB1-201ENST00000219281 ANKRD33Q7Z3H0 272 aa16.77■□□□□ 0.28
USB1-201ENST00000219281 HORMAD1Q86X24 394 aa16.77■□□□□ 0.28
USB1-201ENST00000219281 MFSD4AQ8N468 514 aa16.77■□□□□ 0.28
USB1-201ENST00000219281 GPR26Q8NDV2 337 aa16.77■□□□□ 0.28
USB1-201ENST00000219281 PYCR2Q96C36 320 aa16.77■□□□□ 0.28
USB1-201ENST00000219281 CMTM7Q96FZ5 175 aa16.77■□□□□ 0.28
USB1-201ENST00000219281 ZNF300Q96RE9 604 aaPredicted RBP16.77■□□□□ 0.28
USB1-201ENST00000219281 APOL4Q9BPW4 351 aa16.77■□□□□ 0.28
USB1-201ENST00000219281 EBPLQ9BY08 206 aa16.77■□□□□ 0.28
USB1-201ENST00000219281 BACE2Q9Y5Z0 518 aa16.77■□□□□ 0.28
USB1-201ENST00000219281 KCNE1BA0A087WTH5 132 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 RGS10O43665 173 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 FAM20BO75063 409 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 BMP4P12644 408 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 ENGP17813 658 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 HOXA9P31269 272 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 CCR7P32248 378 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 MNX1P50219 401 aaPredicted RBP16.77■□□□□ 0.27
USB1-201ENST00000219281 CXCR4P61073 352 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 SMAD3P84022 425 aaKnown RBP16.77■□□□□ 0.27
USB1-201ENST00000219281 VLDLRP98155 873 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 GPR33Q49SQ1 333 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 SLC39A5Q6ZMH5 540 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 SERPINA11Q86U17 422 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 RNF175Q8N4F7 328 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 SKA2Q8WVK7 121 aaPredicted RBP16.77■□□□□ 0.27
USB1-201ENST00000219281 NELL1Q92832 810 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 UBE2FQ969M7 185 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 ERLEC1Q96DZ1 483 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 RASSF1Q9NS23 344 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 ATAD3AQ9NVI7 634 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 DNMT3BQ9UBC3 853 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms