RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Gpr17Q6NS65 339 aa17.84■□□□□ 0.45
Trim47-202ENSMUST00000106441 Tas2r131Q7M708 310 aa17.84■□□□□ 0.45
Trim47-202ENSMUST00000106441 Olfr213Q7TS32 327 aa17.84■□□□□ 0.45
Trim47-202ENSMUST00000106441 TxlngQ8BHN1 524 aa17.84■□□□□ 0.45
Trim47-202ENSMUST00000106441 Prox2Q8BII1 593 aa17.84■□□□□ 0.45
Trim47-202ENSMUST00000106441 Gykl1Q8C635 549 aa17.84■□□□□ 0.45
Trim47-202ENSMUST00000106441 Appl1Q8K3H0 707 aa17.84■□□□□ 0.45
Trim47-202ENSMUST00000106441 Ankrd49Q8VE42 238 aa17.84■□□□□ 0.45
Trim47-202ENSMUST00000106441 Nprl3Q8VIJ8 569 aa17.84■□□□□ 0.45
Trim47-202ENSMUST00000106441 Emid1Q91VF5 444 aa17.84■□□□□ 0.45
Trim47-202ENSMUST00000106441 Fig4Q91WF7 907 aa17.84■□□□□ 0.45
Trim47-202ENSMUST00000106441 Mfsd10Q9D2V8 456 aaKnown RBP17.84■□□□□ 0.45
Trim47-202ENSMUST00000106441 Gbe1Q9D6Y9 702 aa17.84■□□□□ 0.45
Trim47-202ENSMUST00000106441 AgkQ9ESW4 421 aa17.84■□□□□ 0.45
Trim47-202ENSMUST00000106441 HephQ9Z0Z4 1157 aa17.84■□□□□ 0.45
Trim47-202ENSMUST00000106441 Vmn1r238E9Q373 306 aa17.83■□□□□ 0.45
Trim47-202ENSMUST00000106441 Rnf165E9QAU8 347 aa17.83■□□□□ 0.45
Trim47-202ENSMUST00000106441 GfapP03995 430 aa17.83■□□□□ 0.45
Trim47-202ENSMUST00000106441 AprtP08030 180 aa17.83■□□□□ 0.45
Trim47-202ENSMUST00000106441 Ppp2r2bQ6ZWR4 443 aa17.83■□□□□ 0.45
Trim47-202ENSMUST00000106441 Wipi2Q80W47 445 aa17.83■□□□□ 0.45
Trim47-202ENSMUST00000106441 Fam72aQ8BFZ8 149 aa17.83■□□□□ 0.45
Trim47-202ENSMUST00000106441 Q8BHR8 331 aa17.83■□□□□ 0.45
Trim47-202ENSMUST00000106441 Cars2Q8BYM8 551 aa17.83■□□□□ 0.45
Trim47-202ENSMUST00000106441 Chchd4Q8VEA4 139 aa17.83■□□□□ 0.45
Trim47-202ENSMUST00000106441 Olfr846Q8VET8 312 aa17.83■□□□□ 0.45
Trim47-202ENSMUST00000106441 Scpep1Q920A5 452 aa17.83■□□□□ 0.45
Trim47-202ENSMUST00000106441 Ubox5Q925F4 539 aa17.83■□□□□ 0.45
Trim47-202ENSMUST00000106441 Capns2Q9D7J7 247 aa17.83■□□□□ 0.45
Trim47-202ENSMUST00000106441 Myg1Q9JK81 380 aa17.83■□□□□ 0.45
Trim47-202ENSMUST00000106441 RhoP15409 348 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Rab8aP55258 207 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Rin3P59729 980 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Kcnj13P86046 360 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Crisp1Q03401 244 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Abraxas2Q3TCJ1 415 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Secisbp2Q3U1C4 858 aaKnown RBP17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Parp8Q3UD82 852 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Mapkapk3Q3UMW7 384 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Syndig1lQ3USQ7 237 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Pnpla1Q3V1D5 599 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Prkd1Q62101 918 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Usp7Q6A4J8 1103 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Slc39a10Q6P5F6 833 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 PdprQ7TSQ8 878 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Arhgap12Q8C0D4 838 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Tbl3Q8C4J7 801 aaKnown RBP17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Olfr1310Q8VF85 312 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Slc15a4Q91W98 574 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Dpy30Q99LT0 99 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Tex13bQ99MW5 186 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Zswim1Q9CWV7 455 aaKnown RBP17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Armc8Q9DBR3 673 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Rcan2Q9JHG2 197 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Smad9Q9JIW5 430 aa17.83■□□□□ 0.44
Trim47-202ENSMUST00000106441 Pcsk5Q04592 1877 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 4933424G06RikA0A140LIP3 267 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 SelenovD3YXG1 328 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Acbd4E9Q289 327 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Rnf169E9Q7F2 694 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Gtf2h4O70422 463 aaKnown RBP17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Mtnd4P03911 459 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 GzmcP08882 248 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 MndaP0DOV1 425 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Ccl4P14097 92 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 GlulP15105 373 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Cxcr5Q04683 374 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Cyp2j13Q3UNV4 503 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Ankrd42Q3V096 527 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 MslnQ61468 625 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Klhl5Q6PFE1 708 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 AftphQ80WT5 931 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 CptpQ8BS40 216 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Rcor1Q8CFE3 480 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Q8K207 121 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Trim31Q8R0K2 507 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Actr8Q8R2S9 624 aaKnown RBP17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Smarcd2Q99JR8 531 aaKnown RBP17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Rgs18Q99PG4 235 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Necab3Q9D6J4 353 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Snx5Q9D8U8 404 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 AnkhQ9JHZ2 492 aa17.82■□□□□ 0.44
Trim47-202ENSMUST00000106441 Cylc1A0A1B0GR13 642 aa17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 Mllt3A2AM29 569 aa17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 Gbp11A9YVJ5 442 aa17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 Catsperg2C6KI89 1145 aa17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 Spdye4cI6XKQ3 339 aa17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 Vmn2r31L7N1Z4 861 aa17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 Prkag1O54950 330 aa17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 JundP15066 341 aa17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 Ugt2b17P17717 530 aa17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 Erp29P57759 262 aaKnown RBP17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 Rps24P62849 133 aaKnown RBP17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 Cnpy1Q4VAB4 94 aa17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 Pfkfb4Q6DTY7 469 aa17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 Lemd2Q6DVA0 511 aa17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 Znf366Q6NS86 746 aa17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 Q6P2K3 674 aa17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 Ubr7Q8BU04 425 aa17.81■□□□□ 0.44
Trim47-202ENSMUST00000106441 Tprg1Q8CB49 279 aa17.81■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms