RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Hmgn3Q9DCB1 99 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Slc19a2Q9EQN9 498 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Mknk1O08605 427 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Hcn1O88704 910 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Vps51Q3UVL4 782 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Sema3gQ4LFA9 780 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Epha1Q60750 977 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 RgnQ64374 299 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Kctd9Q80UN1 339 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Spata19Q9DAQ9 154 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Cyp2b13A6H6J2 491 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Spin2dB1B0R2 236 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Zfp938E9Q9G3 579 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Prss39O70169 367 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Olfr328Q5NCD3 310 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Taar7dQ5QD10 358 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Nipa1Q8BHK1 323 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Q8BN57 294 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Trmt2bQ8BQJ6 493 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Rasgef1bQ8JZL7 473 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 SdslQ8R238 329 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Dnaja2Q9QYJ0 412 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Vmn2r90E9PXJ8 863 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Got2P05202 430 aaKnown RBP15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Tead3P70210 439 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 BC061237Q6P8I2 184 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 KptnQ8VCX6 430 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Mrpl49Q9CQ40 166 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 ArskQ9D2L1 553 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Arl11Q6P3A9 176 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Mon1aQ6PDG8 556 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Cox15Q8BJ03 413 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Mfsd14bQ8CIA9 507 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Irak3Q8K4B2 609 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Pcdhb4Q91XZ6 784 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Abcb8Q9CXJ4 717 aa15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Pak1ip1Q9DCE5 382 aaKnown RBP15.38■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Zfr2E9Q5M4 874 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 AlplP09242 524 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 QrfprP83861 433 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Olfr1477Q7TQQ7 315 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Paip1Q8VE62 400 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Scgb2b17S4R2V3 82 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Dbx2F8VQH7 377 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Prkar1bP12849 381 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Dpf3P58269 378 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Stk35Q80ZW0 539 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 BpifcQ8C186 509 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 RadxQ8C779 850 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 FancgQ9EQR6 623 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Gm17190V9GX38 357 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Hecw1Q8K4P8 1604 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Hoxc8P09025 242 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 LdlrP35951 862 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Lrig1P70193 1091 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 GscQ02591 256 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Orm3Q63805 206 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Mab21l2Q8BPP1 359 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Cars2Q8BYM8 551 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Q8CCC3 530 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Kiaa0141Q9DCV6 510 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Abca6Q8K441 1624 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Dip2aQ8BWT5 1523 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Lama4P97927 1816 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Ism2D3Z6A3 493 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Neurod4O09105 330 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Npy5rO70342 466 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Zfp26P10076 861 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Pmp22P16646 161 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 TP20293 436 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 FaddQ61160 205 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Tspan18Q80WR1 248 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Cdkl3Q8BLF2 595 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Zmiz2Q8CIE2 920 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Asb17Q8VHP9 295 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 SpnP15702 395 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 SPINDOCQ05AH6 381 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Lingo3Q6GQU6 589 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Rpl35Q6ZWV7 123 aaKnown RBP15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Rap2aQ80ZJ1 183 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Atat1Q8K341 421 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Gm5114W4VSN8 858 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Cntnap4Q99P47 1310 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Hsbp1l1B2RXB2 72 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Aldh3b2E9Q3E1 479 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Rps3aP97351 264 aaKnown RBP15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Pld5Q3UNN8 536 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Lgr6Q3UVD5 967 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Nr0b2Q62227 260 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Vrk2Q8BN21 503 aaKnown RBP15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Sp110Q8BVK9 445 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Dppa4Q8CCG4 296 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Tmem5Q8VDX6 444 aa15.37■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Mageb4A2A9R3 556 aa15.36■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Hnrnph3D3Z3N4 346 aaKnown RBP15.36■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Limk2O54785 638 aa15.36■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Sypl2O89104 264 aa15.36■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Cdh1P09803 884 aa15.36■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Pde12Q3TIU4 608 aa15.36■□□□□ 0.05
Ubr3-201ENSMUST00000055758 Mpzl3Q3V3F6 237 aa15.36■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms