RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Mmp11Q02853 492 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Igfbp5Q07079 271 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Padi2Q08642 673 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Usp39Q3TIX9 564 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Fbxw18Q3TSA9 469 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Tmem247Q497K7 211 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Colgalt2Q6NVG7 625 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Bhlhb9Q6PB60 539 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 FukQ7TMC8 1090 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Zfyve1Q810J8 777 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Rab39aQ8BHD0 217 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Cpsf4Q8BQZ5 211 aaKnown RBP9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Tigd4Q8BUZ3 513 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Tmem259Q8CIV2 574 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Unc5aQ8K1S4 898 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Olfr729Q8VET4 323 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Aim2Q91VJ1 354 aaKnown RBP9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 MINDY3Q9CV28 444 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Q9D454 513 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Htra1Q9R118 480 aa9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Stau1Q9Z108 487 aaKnown RBP9.55□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Plxna3P70208 1872 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Cyp2j8G3UZ38 503 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Hipk1O88904 1210 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 P01807 119 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Cntn5P68500 1098 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 VldlrP98156 873 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Nfatc2Q60591 927 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Adam2Q60718 735 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Prkd1Q62101 918 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Fam149b1Q6NSV7 578 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Nudcd1Q6PIP5 582 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Sdr16c5Q7TQA3 309 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Olfr169Q7TS53 313 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Vac14Q80WQ2 782 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Cers6Q8C172 384 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Steap3Q8CI59 488 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 H2-Q4Q8HWB2 354 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Syn3Q8JZP2 579 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Retreg1dQ8VE91 480 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 B3galt6Q91Z92 325 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Marc2Q922Q1 338 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Pin4Q9CWW6 131 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Mfsd10Q9D2V8 456 aaKnown RBP9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Kbtbd12Q9D618 625 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Ppil6Q9D6D8 278 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Rhobtb1Q9DAK3 695 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Uba7Q9DBK7 977 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Dap3Q9ER88 391 aaKnown RBP9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Gipc2Q9Z2H7 314 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 RlfA2A7F4 1918 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Slc25a54B1AUS6 473 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Vmn2r118E9Q1C1 853 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Gp1baO35930 734 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Cxcr3O88410 367 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Akap3O88987 864 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 P01665 111 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 P01666 111 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Bmp6P20722 510 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Htr1bP28334 386 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Mkl2P59759 1080 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Pde7aP70453 456 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 ArvcfP98203 962 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 P2rx5Q3UYI1 455 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Olfr814Q7TRH4 310 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Efr3aQ8BG67 819 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Sephs1Q8BH69 392 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Fam110bQ8C739 366 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Angptl7Q8R1Q3 337 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Vmn1r215Q8R264 300 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Vmn1r30Q8R2D2 302 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Taf12Q8VE65 161 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Tnfaip8Q921Z5 198 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Prmt3Q922H1 532 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 TrabdQ99JY4 376 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Dhrs7Q9CXR1 338 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Efhc2Q9D485 750 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Nufip1Q9QXX8 484 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Dctn3Q9Z0Y1 186 aa9.54□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Gm43796A0A0J9YV32 372 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Nhsl2B1AXH1 854 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Mybpc1D3YU50 1127 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Gm10800D3Z496 220 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Il13ra1O09030 424 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Cyp1a1P00184 524 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Gstm1P10649 218 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Slc1a5P51912 553 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Hpcal1P62748 193 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Cct7P80313 544 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 March5Q3KNM2 278 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Ap5b1Q3TAP4 876 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Tbc1d24Q3UUG6 561 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Pwwp2aQ69Z61 730 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Olfr1197Q7TR13 314 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Olfr1196Q7TR14 314 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Nrde2Q80XC6 1172 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Hmbox1Q8BJA3 419 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 MylipQ8BM54 445 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Ubr7Q8BU04 425 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Cfap61Q8CEL2 1252 aa9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms