RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Rpl9P51410 192 aaKnown RBP13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Aff3P51827 1254 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 SqleP52019 572 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Slc16a1P53986 493 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Acod1P54987 488 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gbx1P82976 418 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Tstd2Q3U269 495 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Dlgap3Q6PFD5 977 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Mfn2Q80U63 757 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Rbbp8Q80YR6 893 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Nim1kQ8BHI9 436 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Eme1Q8BJW7 570 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Q8CC96 669 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Tmem125Q8CHQ6 216 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Glcci1Q8K3I9 537 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vmn1r22Q8R2D1 302 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vmn1r33Q8R2E0 305 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Elf5Q8VDK3 253 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 DgkgQ91WG7 788 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Plpp3Q99JY8 312 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fam32aQ9CR80 112 aaKnown RBP13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fabp12Q9DAK4 132 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Pak1ip1Q9DCE5 382 aaKnown RBP13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 AnkhQ9JHZ2 492 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 IkbkeQ9R0T8 717 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Stau1Q9Z108 487 aaKnown RBP13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Upk1bQ9Z2C6 260 aa13.1□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gm5565A0A0G2JGB2 317 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Zfp964B2RR88 472 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Olfr287E9PZS7 322 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vmn2r114E9Q281 856 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 OgdhlE9Q7L0 1029 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gm3696K7N751 203 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Sod3O09164 251 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Kpna6O35345 536 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Dhcr7O88455 471 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Rrm2P11157 390 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Kcnj12P52187 427 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Scn1bP97952 218 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Pou1f1Q00286 291 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Tgtp2Q3T9E4 415 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 StimateQ3UF25 288 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Naa11Q3UX61 218 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Tgtp1Q62293 415 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Pou4f2Q63934 411 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Atl1Q8BH66 558 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Elmo1Q8BPU7 727 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ndrg4Q8BTG7 352 aaKnown RBP13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Phf11aQ8BVM9 293 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gk5Q8BX05 534 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Plekha4Q8VC98 588 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Aim2Q91VJ1 354 aaKnown RBP13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 OoepQ9CWE6 164 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ndufaf7Q9CWG8 436 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Mgme1Q9CXC3 338 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 EbplQ9D0P0 206 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Exoc2Q9D4H1 924 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fam122aQ9DB52 284 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Ing1Q9QXV3 279 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Sept5Q9Z2Q6 369 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 RlfA2A7F4 1918 aa13.09□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fam136b-psA0A140T8T1 138 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 A0A286YDU1 74 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Mllt3A2AM29 569 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Adh6aE9Q5Z6 375 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gm10639E9Q6L7 222 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vmn2r85G3UW56 850 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vmn2r92L7N2A4 860 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Bcl7cO08664 217 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Sult3a1O35403 293 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Vti1bO88384 232 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 ItgamP05555 1153 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gsta2P10648 222 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Serpinb2P12388 415 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Cdh2P15116 906 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Stfa3P35173 103 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Entpd1P55772 510 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 MocosQ14CH1 862 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Gpr19Q61121 415 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Fam189a1Q6A044 515 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Arhgap12Q8C0D4 838 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Prkd3Q8K1Y2 889 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Q8K207 121 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 MfrpQ8K480 584 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Q9CPZ3 230 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 NtpcrQ9CQA9 190 aaKnown RBP13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 CacybpQ9CXW3 229 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Dusp26Q9D700 211 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 HephQ9Z0Z4 1157 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Trpm7Q923J1 1863 aa13.08□□□□□ -0.31
Nup88-201ENSMUST00000035283 Plin4O88492 1403 aa13.08□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gm6811E9Q3Y8 510 aa13.08□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gm2237E9Q501 211 aa13.08□□□□□ -0.32
Nup88-201ENSMUST00000035283 Fam181aJ3QNB7 292 aa13.08□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gm3591K7N6X2 186 aa13.08□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gfra2O08842 464 aa13.08□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ptch2O35595 1182 aa13.08□□□□□ -0.32
Nup88-201ENSMUST00000035283 Tekt4Q149S1 447 aa13.08□□□□□ -0.32
Nup88-201ENSMUST00000035283 Sel1l2Q3V172 688 aa13.08□□□□□ -0.32
Nup88-201ENSMUST00000035283 Dusp11Q6NXK5 321 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms