RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Ech1O35459 327 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Dhcr7O88455 471 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Chrnb1P09690 501 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Atp6v1e1P50518 226 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Lrpap1P55302 360 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Pou1f1Q00286 291 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 CrxosQ3UL53 246 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 C2cd4cC2CD4Q5HZI2 419 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Ecm1Q61508 559 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 C6.1alQ7M757 291 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Thnsl2Q80W22 483 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Q8BGK9 164 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Crlf2Q8CII9 359 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 TraipQ8VIG6 470 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Slc44a3Q921V7 656 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Aco2Q99KI0 780 aaKnown RBP17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Themis3Q9CU24 569 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Glod5Q9D8I3 148 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Tlr4Q9QUK6 835 aa17.31■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Zfp626A0A0U1RQ84 676 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Gm14744B1AVU4 173 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Pdzd8B9EJ80 1147 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Xkr6E9Q6C8 638 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Lrrc31F6VYM1 502 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 5830473C10RikF8VQ07 620 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Gm14496K7N5U4 849 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Gm6337K7N6X9 211 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Gm3115L7N285 211 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Ackr2O08707 378 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Foxd2O35392 492 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 SqleP52019 572 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 ArntP53762 791 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 VldlrP98156 873 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Trmt10cQ3UFY8 414 aaKnown RBP17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Gm10696Q3UTC4 357 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Eef2kmtQ3UZW7 335 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Dcaf13Q6PAC3 445 aaKnown RBP17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Dpy19l3Q71B07 716 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Hus1Q8BQY8 280 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Cpne3Q8BT60 533 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Dmtf1Q8CE22 761 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Cnot3Q8K0V4 751 aaKnown RBP17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Vmn1r199Q8R280 367 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Ptgr2Q8VDQ1 351 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Olfr791Q8VGJ0 312 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Gemin6Q9CX53 166 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 5430402E10RikQ9D3N5 173 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Taf1dQ9D4V4 322 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Znf207Q9JMD0 495 aaKnown RBP17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 B9d1Q9R1S0 204 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Pex10B1AUE5 324 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Gm11397F6V5V4 377 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 FhP97807 507 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Prelid2Q0VBB0 177 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Gm648Q3UJ22 213 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Cln3Q61124 438 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 CfiQ61129 603 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Tm7sf2Q71KT5 418 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Dnajc15Q78YY6 149 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Olfr1015Q7TR94 312 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Trim62Q80V85 475 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Arhgap11aQ80Y19 987 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Coq4Q8BGB8 266 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Nim1kQ8BHI9 436 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 CptpQ8BS40 216 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Zmym6Q8BS54 1249 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Bag5Q8CI32 447 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Vmn1r24Q8R2D6 296 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Ca9Q8VHB5 437 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Serpinb9gQ8VHQ1 377 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Pcdhac2Q91Y09 1006 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 DarsQ922B2 501 aaKnown RBP17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Atp5f1Q9CQQ7 256 aaKnown RBP17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Rnaseh2aQ9CWY8 301 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Arhgap8Q9CXP4 425 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Pop5Q9DB28 169 aa17.3■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Cd300ld2A2A7W0 305 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Rhox2fA2ANE0 191 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Spats1A2RRY8 269 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Tcea3P23881 347 aaKnown RBP17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 CntfP51642 198 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 AbatP61922 500 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Gbx1P82976 418 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Coq8aQ60936 645 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Ntan1Q64311 310 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Kif18bQ6PFD6 834 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Rbbp8Q80YR6 893 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Hmbox1Q8BJA3 419 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Larp4Q8BWW4 719 aaKnown RBP17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Mblac1Q8BWY4 260 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Vmn1r84Q8R284 318 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Ntmt1Q8R2U4 223 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Cd209dQ91ZW8 237 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Traf7Q922B6 594 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 GhdcQ99J23 532 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Dcun1d5Q9CXV9 237 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Ern1Q9EQY0 977 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Vnn3Q9QZ25 500 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Scamp3O35609 349 aa17.29■□□□□ 0.36
Sqstm1-201ENSMUST00000015981 Klrk1O54709 232 aa17.29■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms