RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Hsfy2Q80Y37 392 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Ptk7Q8BKG3 1062 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Arfrp1Q8BXL7 201 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Q8C0X8 640 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Apoa5Q8C7G5 368 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 NeproQ8R2U2 564 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Adap2Q8R2V5 381 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Grk5Q8VEB1 590 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Wasf3Q8VHI6 501 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Pcdhb4Q91XZ6 784 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Sppl3Q9CUS9 384 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Hddc3Q9D114 179 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Pnp2Q9D8C9 305 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Akr1e2Q9DCT1 301 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Slc5a3Q9JKZ2 718 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Dnajb8Q9QYI7 227 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cd163l1A0A1B0GSB0 991 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gm5788A0A1Y7VK80 144 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Olfr1164A2AVT5 326 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cyp2b13A6H6J2 491 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 1700064H15RikD3Z4D4 81 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Zscan4bE9Q3G0 505 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gm9493F6SVV1 192 aaKnown RBP8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Bard1O70445 765 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Dnmt3aO88508 908 aaKnown RBP8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Mthfd2P18155 350 aaKnown RBP8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Polr3bP59470 1133 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 BcheQ03311 603 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Lrrc58Q3UGP9 366 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Sema3gQ4LFA9 780 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Diras2Q5PR73 199 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Map3k3Q61084 626 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Pced1bQ8BGX1 433 aaKnown RBP8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Prkd2Q8BZ03 875 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Clrn1Q8K445 232 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Prrg2Q8R182 198 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 KlbQ99N32 1043 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Get4Q9D1H7 327 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 CutalQ9D1U5 156 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Rnase10Q9D5A9 208 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Ovca2Q9D7E3 225 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Nmnat1Q9EPA7 285 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Rai2Q9QVY8 529 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Trpm1Q2TV84 1622 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Rex2A2AWF2 685 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cldn24D3YXJ9 220 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Vmn2r125D3Z3M1 369 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Adamts14E9PX39 1209 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gm8159E9Q0R1 267 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Ces2hF6Z9B9 558 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gm21972J3QN38 98 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Taf1aP97357 453 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gsk3aQ2NL51 490 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cln6Q3U466 308 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Lingo2Q3URE9 606 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Zfp791Q497V9 528 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Akt2Q60823 481 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Lrrc39Q8BGI7 337 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Zfp189Q8BKP2 608 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Phf11aQ8BVM9 293 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Bend5Q8C6D4 421 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Exd1Q8CDF7 570 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Zdhhc1Q8R0N9 484 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Olfr808Q8VGI8 312 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Pcdha6Q91Y14 946 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Pcdha2Q91Y17 948 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Mat2bQ99LB6 334 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Mau2Q9D2X5 619 aaKnown RBP8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 TesclQ9DAJ7 231 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 BvesQ9ES83 358 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 NhsB1AV60 1647 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Pcdhgb8A0A140LI48 931 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gm12394A2AKP6 982 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Znf143O70230 638 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Csf1P07141 552 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Zfp28P10078 825 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Ntsr2P70310 416 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Slc2a6Q3UDF0 497 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 McidasQ3UZ45 379 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 MertkQ60805 994 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Tmem151bQ68FE7 561 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Brinp2Q6DFY8 783 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 PdprQ7TSQ8 878 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Zc3hc1Q80YV2 501 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Neto2Q8BNJ6 525 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 MastlQ8C0P0 865 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Rbms2Q8VC70 383 aaKnown RBP8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Q8WUR0 141 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Sult1c2Q9D939 296 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Eif3kQ9DBZ5 218 aa8.97□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gm7970L7N271 213 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gm7980L7N471 213 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cdk5r2O35926 369 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Prkag1O54950 330 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Timm13P62075 95 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cmklr1P97468 371 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Grb7Q03160 535 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 ParpbpQ6IRT3 573 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Rcbtb1Q6NXM2 531 aa8.96□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Taf1cQ6PDZ2 836 aa8.96□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms