RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 MICU2Q8IYU8 434 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 SLC22A15Q8IZD6 547 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 CELF5Q8N6W0 485 aaKnown RBP16.58■□□□□ 0.24
PHGDH-211ENST00000641213 TRIML2Q8N7C3 387 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 HM13Q8TCT9 377 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 ZNF707Q96C28 371 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-211ENST00000641213 ITCHQ96J02 903 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 EGLN2Q96KS0 407 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 CPPED1Q9BRF8 314 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-211ENST00000641213 CCM2Q9BSQ5 444 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 INPP5KQ9BT40 448 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 UGT2B28Q9BY64 529 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 OSBPL6Q9BZF3 934 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 RMND5AQ9H871 391 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 CD320Q9NPF0 282 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 HPS4Q9NQG7 708 aa16.58■□□□□ 0.24
PHGDH-211ENST00000641213 MRPS23Q9Y3D9 190 aaKnown RBP16.58■□□□□ 0.24
PHGDH-211ENST00000641213 MUC22E2RYF6 1773 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-211ENST00000641213 C2orf16Q68DN1 1984 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 SLC5A10A0PJK1 596 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 LINC01553A4QN01 128 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 CXCR6O00574 342 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 ZNF197O14709 1029 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 CLGNO14967 610 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 PER2O15055 1255 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 UGDHO60701 494 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 SCELO95171 688 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 LRATO95237 230 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 B3GALT4O96024 378 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 PCNAP12004 261 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 ACPPP15309 386 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 RPL10P27635 214 aaKnown RBP16.57■□□□□ 0.24
PHGDH-211ENST00000641213 PTPN6P29350 595 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 UBE3AQ05086 875 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 MAP7Q14244 749 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 NKG7Q16617 165 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 CCSMST1Q4G0I0 132 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 CWF19L1Q69YN2 538 aaKnown RBP16.57■□□□□ 0.24
PHGDH-211ENST00000641213 NOXRED1Q6NXP6 359 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 ANKRD46Q86W74 232 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 CALHM3Q86XJ0 350 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 DHRSXQ8N5I4 330 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 FBXO30Q8TB52 745 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 GLMNQ92990 594 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 AURKBQ96GD4 344 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-211ENST00000641213 FBXL20Q96IG2 436 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 HHIPQ96QV1 700 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 LIMD1Q9UGP4 676 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 DMTF1Q9Y222 760 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 FADS3Q9Y5Q0 445 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 DENND4AQ7Z401 1863 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 SNAP29O95721 258 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 GSNP06396 782 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 PCSK2P16519 638 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 CAPGP40121 348 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 GZMMP51124 257 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 MESP2Q0VG99 397 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 XKR6Q5GH73 641 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 TMEM214Q6NUQ4 689 aaKnown RBP16.57■□□□□ 0.24
PHGDH-211ENST00000641213 BORAQ6PGQ7 559 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 TTC33Q6PID6 262 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-211ENST00000641213 AGTRAPQ6RW13 159 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 NRSN1Q8IZ57 195 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 C10orf111Q8N326 155 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 OR52E4Q8NGH9 312 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 WFIKKN2Q8TEU8 576 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 TMBIM1Q969X1 311 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 RSPRY1Q96DX4 576 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 FCRL1Q96LA6 429 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 CCDC138Q96M89 665 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 WRAP53Q9BUR4 548 aaKnown RBP16.57■□□□□ 0.24
PHGDH-211ENST00000641213 WBP1LQ9NX94 342 aa16.57■□□□□ 0.24
PHGDH-211ENST00000641213 STOX2Q9P2F5 926 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-211ENST00000641213 FAM220BPB1ANY3 271 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 E7EQ34 232 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 KPNA3O00505 521 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-211ENST00000641213 WNT9AO14904 365 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 CLIC3O95833 236 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 CDKN2CP42773 168 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 BDKRB1P46663 353 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 ALDH3B2P48448 385 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 METAP1P53582 386 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 ST8SIA6P61647 398 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 TUBA4AP68366 448 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 CSTF3Q12996 717 aaKnown RBP16.56■□□□□ 0.24
PHGDH-211ENST00000641213 KCTD21Q4G0X4 260 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 TMEM220Q6QAJ8 160 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 ZNF786Q8N393 782 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 TMEM132CQ8N3T6 1108 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 WDR20Q8TBZ3 569 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 CSGALNACT1Q8TDX6 532 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 ATL1Q8WXF7 558 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 GFM2Q969S9 779 aaKnown RBP16.56■□□□□ 0.24
PHGDH-211ENST00000641213 FAM162AQ96A26 154 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 GPRC5BQ9NZH0 403 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 CIDEBQ9UHD4 219 aa16.56■□□□□ 0.24
PHGDH-211ENST00000641213 CCDC160A6NGH7 325 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 PSMD11O00231 422 aa16.55■□□□□ 0.24
PHGDH-211ENST00000641213 HOXC11O43248 304 aaPredicted RBP16.55■□□□□ 0.24
PHGDH-211ENST00000641213 SPINT1O43278 529 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms