RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 SPANXN3Q5MJ09 141 aa16.08■□□□□ 0.16
CACNA1A-259ENST00000638114 TCTN3Q6NUS6 607 aa16.08■□□□□ 0.16
CACNA1A-259ENST00000638114 NEK10Q6ZWH5 1172 aa16.08■□□□□ 0.16
CACNA1A-259ENST00000638114 OR2A1Q8NGT9 310 aa16.08■□□□□ 0.16
CACNA1A-259ENST00000638114 GABPB2Q8TAK5 448 aaPredicted RBP16.08■□□□□ 0.16
CACNA1A-259ENST00000638114 ADAMTS17Q8TE56 1095 aa16.08■□□□□ 0.16
CACNA1A-259ENST00000638114 INPP5DQ92835 1189 aa16.08■□□□□ 0.16
CACNA1A-259ENST00000638114 ZUFSPQ96AP4 578 aa16.08■□□□□ 0.16
CACNA1A-259ENST00000638114 EBNA1BP2Q99848 306 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-259ENST00000638114 SELENOSQ9BQE4 189 aa16.08■□□□□ 0.16
CACNA1A-259ENST00000638114 ACAT2Q9BWD1 397 aa16.08■□□□□ 0.16
CACNA1A-259ENST00000638114 ING2Q9H160 280 aa16.08■□□□□ 0.16
CACNA1A-259ENST00000638114 KLHL42Q9P2K6 505 aa16.08■□□□□ 0.16
CACNA1A-259ENST00000638114 ANAPC2Q9UJX6 822 aa16.08■□□□□ 0.16
CACNA1A-259ENST00000638114 DHRS7Q9Y394 339 aa16.08■□□□□ 0.16
CACNA1A-259ENST00000638114 TARM1B6A8C7 271 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 K7EM74 188 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 MYO1CO00159 1063 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 CTSVO60911 334 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 VPS26AO75436 327 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 SYF2O95926 243 aaKnown RBP16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 ERGP11308 486 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 ENO3P13929 434 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 MCM3P25205 808 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 IVDP26440 423 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 CMPK1P30085 196 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 OTX2P32243 289 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 RPA3P35244 121 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 PAFAH1B1P43034 410 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 CCL11P51671 97 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 ARSFP54793 590 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 MORF4L2Q15014 288 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 NKAIN1Q4KMZ8 207 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 TCTE1Q5JU00 501 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 SUSD1Q6UWL2 747 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 TTLL10Q6ZVT0 673 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 ASB18Q6ZVZ8 466 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 RAB43Q86YS6 212 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 CPNE9Q8IYJ1 553 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 CD200R1Q8TD46 325 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 SMPDL3AQ92484 453 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 PKP4Q99569 1192 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 TRIM51Q9BSJ1 452 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 NAT9Q9BTE0 207 aa16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 AARSD1Q9BTE6 412 aaKnown RBP16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 PTRH2Q9Y3E5 179 aaKnown RBP16.07■□□□□ 0.16
CACNA1A-259ENST00000638114 A0A1B0GX78 115 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 ZNF839A8K0R7 811 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 TTI1O43156 1089 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 MPC1LP0DKB6 136 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 HSD17B2P37059 387 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 FOLR3P41439 243 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 PNLIPRP1P54315 467 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 VSX2P58304 361 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 TLE1Q04724 770 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 GRM7Q14831 915 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 ARHGAP19Q14CB8 494 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 NAA25Q14CX7 972 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 COLEC12Q5KU26 742 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 HP1BP3Q5SSJ5 553 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 IGDCC3Q8IVU1 814 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 PDIK1LQ8N165 341 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 TTC29Q8NA56 475 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 C2CD4AQ8NCU7 369 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 ASB11Q8WXH4 323 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 CFAP36Q96G28 342 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 NDNQ99608 321 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 DPH7Q9BTV6 452 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 SLC25A23Q9BV35 468 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 PPANQ9NQ55 473 aaKnown RBP16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 CUTCQ9NTM9 273 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 TRMT6Q9UJA5 497 aaKnown RBP16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 CHMP2BQ9UQN3 213 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 KLK4Q9Y5K2 254 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 MED13Q9UHV7 2174 aa16.06■□□□□ 0.16
CACNA1A-259ENST00000638114 A0A0J9YVX5 310 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 CCDC188H7C350 402 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 NRP2O60462 931 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 KLF7O75840 302 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 WISP1O95388 367 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 SLC16A8O95907 504 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 CD63P08962 238 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 GCGRP47871 477 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 CARSP49589 748 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 YBX1P67809 324 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 KLRB1Q12918 225 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 ATP1A4Q13733 1029 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 FRMPD2BQ6IN97 320 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 UGT3A1Q6NUS8 523 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 PIWIL4Q7Z3Z4 852 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 TEX19Q8NA77 164 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 FBXO15Q8NCQ5 510 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 PPFIBP2Q8ND30 876 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 CERS2Q96G23 380 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 PWWP2AQ96N64 755 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 ZNF285Q96NJ3 590 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 TRIM31Q9BZY9 425 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 EPN3Q9H201 632 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 SLC6A20Q9NP91 592 aa16.05■□□□□ 0.16
CACNA1A-259ENST00000638114 MRPS30Q9NP92 439 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms