RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 ARSFP54793 590 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 ARL4CP56559 192 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 DCDP81605 110 aaKnown RBP13.26□□□□□ -0.29
PNKP-228ENST00000637325 IL10RAQ13651 578 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 FASTKQ14296 549 aaKnown RBP13.26□□□□□ -0.29
PNKP-228ENST00000637325 NAA25Q14CX7 972 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 NCF4Q15080 339 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 CYP2A13Q16696 494 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 MSS51Q4VC12 460 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 LACTB2Q53H82 288 aaPredicted RBP13.26□□□□□ -0.29
PNKP-228ENST00000637325 FCRL6Q6DN72 434 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 RHBDD2Q6NTF9 364 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 FAM198BQ6UWH4 519 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 ATG14Q6ZNE5 492 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 TTC29Q8NA56 475 aaPredicted RBP13.26□□□□□ -0.29
PNKP-228ENST00000637325 C2CD4AQ8NCU7 369 aaPredicted RBP13.26□□□□□ -0.29
PNKP-228ENST00000637325 SMPDL3AQ92484 453 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 SNF8Q96H20 258 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 KRT12Q99456 494 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 PKP4Q99569 1192 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 SELENOSQ9BQE4 189 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 TRIM51Q9BSJ1 452 aa13.26□□□□□ -0.29
PNKP-228ENST00000637325 AARSD1Q9BTE6 412 aaKnown RBP13.26□□□□□ -0.29
PNKP-228ENST00000637325 IFT80Q9P2H3 777 aaPredicted RBP13.26□□□□□ -0.29
PNKP-228ENST00000637325 DHCR7Q9UBM7 475 aaKnown RBP13.26□□□□□ -0.29
PNKP-228ENST00000637325 TRMT6Q9UJA5 497 aaKnown RBP13.26□□□□□ -0.29
PNKP-228ENST00000637325 CNTRLQ7Z7A1 2325 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 DOCK10Q96BY6 2186 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 SCN3AQ9NY46 2000 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 ARGFXA6NJG6 315 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 EFCAB8A8MWE9 144 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 H3BMH7 237 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 MYO1CO00159 1063 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 NDC80O14777 642 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 ZBTB14O43829 449 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 CAPN1P07384 714 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 IVDP26440 423 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 CASQ1P31415 396 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 ELK3P41970 407 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 PNLIPRP1P54315 467 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 GRM7Q14831 915 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 ARHGAP19Q14CB8 494 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 HIF1AQ16665 826 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.25□□□□□ -0.29
PNKP-228ENST00000637325 TCTE1Q5JU00 501 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 HIBCHQ6NVY1 386 aaPredicted RBP13.25□□□□□ -0.29
PNKP-228ENST00000637325 TTLL10Q6ZVT0 673 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 RAB43Q86YS6 212 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 CPNE9Q8IYJ1 553 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 OR2L3Q8NG85 312 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 GIMAP7Q8NHV1 300 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 CERS2Q96G23 380 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 GBP5Q96PP8 586 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 NDNQ99608 321 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 DHRS4Q9BTZ2 278 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 ACAT2Q9BWD1 397 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 MRPS30Q9NP92 439 aaKnown RBP13.25□□□□□ -0.29
PNKP-228ENST00000637325 ACSS2Q9NR19 701 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 ABCF3Q9NUQ8 709 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 TAS2R13Q9NYV9 303 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 ZC3H7BQ9UGR2 993 aaKnown RBP13.25□□□□□ -0.29
PNKP-228ENST00000637325 TLK1Q9UKI8 766 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 CHMP2BQ9UQN3 213 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 NUP210LQ5VU65 1888 aa13.25□□□□□ -0.29
PNKP-228ENST00000637325 A0A0J9YVX5 310 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 A0A1W2PPV9 198 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 SUV39H1O43463 412 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 CCNDBP1O95273 360 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 PIM1P11309 404 aaPredicted RBP13.24□□□□□ -0.29
PNKP-228ENST00000637325 MCM3P25205 808 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 OTX2P32243 289 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 SKIV2L2P42285 1042 aaKnown RBP13.24□□□□□ -0.29
PNKP-228ENST00000637325 RGS4P49798 205 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 CCL11P51671 97 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 VSX2P58304 361 aaPredicted RBP13.24□□□□□ -0.29
PNKP-228ENST00000637325 CHAF1BQ13112 559 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 SLC9A5Q14940 896 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 NKAIN1Q4KMZ8 207 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 FAM69BQ5VUD6 431 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 YOD1Q5VVQ6 348 aaPredicted RBP13.24□□□□□ -0.29
PNKP-228ENST00000637325 ZNF385CQ66K41 422 aaPredicted RBP13.24□□□□□ -0.29
PNKP-228ENST00000637325 LRRC8EQ6NSJ5 796 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 SUSD1Q6UWL2 747 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 KIAA0408Q6ZU52 694 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 UBE2R2Q712K3 238 aaPredicted RBP13.24□□□□□ -0.29
PNKP-228ENST00000637325 IGDCC3Q8IVU1 814 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 APLFQ8IW19 511 aaPredicted RBP13.24□□□□□ -0.29
PNKP-228ENST00000637325 PALM2Q8IXS6 379 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 OR2A1Q8NGT9 310 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 CD200R1Q8TD46 325 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 ASB11Q8WXH4 323 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 LRRC39Q96DD0 335 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 PWWP2AQ96N64 755 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 DPH7Q9BTV6 452 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 UTP6Q9NYH9 597 aaKnown RBP13.24□□□□□ -0.29
PNKP-228ENST00000637325 TP53TG5Q9Y2B4 290 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 MED16Q9Y2X0 877 aa13.24□□□□□ -0.29
PNKP-228ENST00000637325 PTRH2Q9Y3E5 179 aaKnown RBP13.24□□□□□ -0.29
PNKP-228ENST00000637325 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.24□□□□□ -0.29
PNKP-228ENST00000637325 RP1L1Q8IWN7 2480 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms