RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 SLC28A1O00337 649 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 NPPAP01160 153 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 TRBC1P01850 177 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 KRT6AP02538 564 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 MT-ND2P03891 347 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 KRT6BP04259 564 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 ANXA5P08758 320 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 KRT6CP48668 564 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 NUDT6P53370 316 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 ABRQ12979 859 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 GPNMBQ14956 572 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 OR5K1Q8NHB7 308 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 TAMM41Q96BW9 452 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 CLSTN3Q9BQT9 956 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 HERC2P3Q9BVR0 1158 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 VN1R3Q9BXE9 311 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 AASDHPPTQ9NRN7 309 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 UGT2B4P06133 528 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 CDH3P22223 829 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 BCAP31P51572 246 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 COL9A2Q14055 689 aaPredicted RBP13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 FXNQ16595 210 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 CTF1Q16619 201 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 RBM48Q5RL73 367 aaKnown RBP13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 DNAJB7Q7Z6W7 309 aaPredicted RBP13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 HORMAD1Q86X24 394 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 TMEM132CQ8N3T6 1108 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 LILRA3Q8N6C8 439 aaPredicted RBP13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 SH3YL1Q96HL8 342 aaPredicted RBP13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 P2RY13Q9BPV8 354 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 MAGEE1Q9HCI5 957 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 ITM2CQ9NQX7 267 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 BLOC1S6Q9UL45 172 aa13.65□□□□□ -0.22
CACNA1A-228ENST00000636610 A0A1W2PQ45 241 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 A0A1W2PQY0 241 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 A8MU76 341 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 ZNF99A8MXY4 864 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 FZD6O60353 706 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 FAM20BO75063 409 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 SCELO95171 688 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 POU2F1P14859 743 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 WEE1P30291 646 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 CLK3P49761 638 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 IFITM3Q01628 133 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 SOWAHCQ53LP3 525 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 CPZQ66K79 652 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 GPR149Q86SP6 731 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 ADCK1Q86TW2 530 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 SYT12Q8IV01 421 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 CMTM8Q8IZV2 173 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 NXPE1Q8N323 547 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 ZCCHC7Q8N3Z6 543 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 FAR1Q8WVX9 515 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 RUBCNLQ9H714 662 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 SIRT5Q9NXA8 310 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 BTBD3Q9Y2F9 522 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 H7C4K7 107 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 SAP18O00422 153 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 FPGTO14772 594 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 ADAM23O75077 832 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 ACPPP15309 386 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 OR1E2P47887 323 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 TUFMP49411 452 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 B4GALNT1Q00973 533 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 MVKQ03426 396 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 GRSF1Q12849 480 aaKnown RBP eCLIP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 CHIT1Q13231 466 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 FAM26DQ5JW98 314 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 ZNF691Q5VV52 312 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 DSG4Q86SJ6 1040 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 BBS7Q8IWZ6 715 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 LZICQ8WZA0 190 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 SH3KBP1Q96B97 665 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 REXO5Q96IC2 774 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 KCNC2Q96PR1 638 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 CPPED1Q9BRF8 314 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 KLF16Q9BXK1 252 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 TMEM121BQ9BXQ6 578 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 MTG2Q9H4K7 406 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 YIPF1Q9Y548 306 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 TMEM202A6NGA9 273 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 H7C0S8 307 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 CLIC1O00299 241 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 YY2O15391 372 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 COX7A2P14406 83 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 PBLDP30039 288 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 MASP1P48740 699 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 EIF2B2P49770 351 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 C5orf22Q49AR2 442 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 CRTC1Q6UUV9 634 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 CERS6Q6ZMG9 384 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 PAGE2Q7Z2X7 111 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 CYP2U1Q7Z449 544 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 LSRQ86X29 649 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 TTC29Q8NA56 475 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 ST13P5Q8NFI4 369 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 ITFG2Q969R8 447 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 TUBA1CQ9BQE3 449 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 YTHDF1Q9BYJ9 559 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms