RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 L1CAMP32004 1257 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 CDH15P55291 814 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 TARDBPQ13148 414 aaKnown RBP eCLIP15.74■□□□□ 0.11
CLN5-208ENST00000636183 CHRNA6Q15825 494 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 GPATCH1Q9BRR8 931 aaKnown RBP15.74■□□□□ 0.11
CLN5-208ENST00000636183 DEFB126Q9BYW3 111 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 DUX1O43812 170 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 C2P06681 752 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 MYCLP1P12525 358 aaPredicted RBP15.74■□□□□ 0.11
CLN5-208ENST00000636183 HTR7P34969 479 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 DENND5AQ6IQ26 1287 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 TRAPPC6BQ86SZ2 158 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 SFRP1Q8N474 314 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 PLEKHG4BQ96PX9 1271 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 A0A1W2PRB8 838 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 MXD1Q05195 221 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 MYLK3Q32MK0 819 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 NKAPLQ5M9Q1 402 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 PLCZ1Q86YW0 608 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 ZNF676Q8N7Q3 588 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 PDPRQ8NCN5 879 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 RFKQ969G6 155 aa15.74■□□□□ 0.11
CLN5-208ENST00000636183 PLD2O14939 933 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 UGT2B11O75310 529 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 SNU13P55769 128 aaKnown RBP15.73■□□□□ 0.11
CLN5-208ENST00000636183 THOC7Q6I9Y2 204 aaKnown RBP15.73■□□□□ 0.11
CLN5-208ENST00000636183 NAT14Q8WUY8 206 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 SLAMF7Q9NQ25 335 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 ZCCHC3Q9NUD5 404 aaKnown RBP15.73■□□□□ 0.11
CLN5-208ENST00000636183 TVP23BQ9NYZ1 205 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 FZD10Q9ULW2 581 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 UPK3BL1B0FP48 263 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 FAM155AB1AL88 458 aaPredicted RBP15.73■□□□□ 0.11
CLN5-208ENST00000636183 UPK3BL2E5RIL1 263 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 BLOC1S5-TXNDC5H3BN57 136 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 ACOT7O00154 380 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 MPPED1O15442 326 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 APOC1P02654 83 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 MT-ND1P03886 318 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 CRISP3P54108 245 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 TMEM35AQ53FP2 167 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 BICRALQ6AI39 1079 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 ZNF613Q6PF04 617 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 LINGO2Q7L985 606 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 CMKLR1Q99788 373 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 TFECO14948 347 aaPredicted RBP15.73■□□□□ 0.11
CLN5-208ENST00000636183 KCNJ13O60928 360 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 KCNQ1P51787 676 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 ARG2P78540 354 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 OCLNQ16625 522 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 DNM1P34Q6PK57 102 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 TNFAIP8L1Q8WVP5 186 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 DNAJC19Q96DA6 116 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 CDK15Q96Q40 435 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 EPYCQ99645 322 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 RC3H2Q9HBD1 1191 aaKnown RBP15.73■□□□□ 0.11
CLN5-208ENST00000636183 ACAD8Q9UKU7 415 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 LRRIQ1Q96JM4 1722 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 GADD45GO95257 159 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 AP2A1O95782 977 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 PAK4O96013 591 aaPredicted RBP15.73■□□□□ 0.11
CLN5-208ENST00000636183 RHOP08100 348 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 NOMO1Q15155 1222 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 TCEAL3Q969E4 200 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 COPS4Q9BT78 406 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 CASP7P55210 303 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 DNASE1L3Q13609 305 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 SLC51AQ86UW1 340 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 TCEANCQ8N8B7 351 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 ZNF565Q8N9K5 539 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 OR13C4Q8NGS5 318 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 VNN3Q9NY84 501 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 PCDHB10Q9UN67 800 aa15.73■□□□□ 0.11
CLN5-208ENST00000636183 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.73■□□□□ 0.11
CLN5-208ENST00000636183 ZC3H13Q5T200 1668 aaKnown RBP15.72■□□□□ 0.11
CLN5-208ENST00000636183 CLDN7O95471 211 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 JUNP05412 331 aaKnown RBP15.72■□□□□ 0.11
CLN5-208ENST00000636183 ATP1B2P14415 290 aaPredicted RBP15.72■□□□□ 0.11
CLN5-208ENST00000636183 SLC10A7Q0GE19 358 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 EXOC3L2Q2M3D2 409 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 CCDC120Q96HB5 630 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 KCNK13Q9HB14 408 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 ZDHHC3Q9NYG2 299 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 COL20A1Q9P218 1284 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 A0A1W2PPM1 405 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 SOX1O00570 391 aaPredicted RBP15.72■□□□□ 0.11
CLN5-208ENST00000636183 GPR107Q5VW38 600 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 SLC25A25Q6KCM7 469 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 PAOXQ6QHF9 649 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 FOXRED2Q8IWF2 684 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 SCO2O43819 266 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 CD48P09326 243 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 ZNF35P13682 527 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 MAGP20916 626 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 DNAJA1P31689 397 aaKnown RBP15.72■□□□□ 0.11
CLN5-208ENST00000636183 BRAT1Q6PJG6 821 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 LYSMD3Q7Z3D4 306 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 OR51F1A6NGY5 319 aa15.72■□□□□ 0.11
CLN5-208ENST00000636183 FARS2O95363 451 aaKnown RBP15.72■□□□□ 0.11
CLN5-208ENST00000636183 FCER2P06734 321 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms