RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 MAOAP21397 527 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 TCF7P36402 384 aaPredicted RBP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 NBL1P41271 181 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 PPP3CCP48454 512 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 METAP2P50579 478 aaKnown RBP eCLIP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 RASSF2P50749 326 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 GPR143P51810 404 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 VCPP55072 806 aaKnown RBP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 MRPS6P82932 125 aaKnown RBP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 ADORA2A-AS1P86434 159 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 GAD2Q05329 585 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 SIGLEC14Q08ET2 396 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 ITGB3BPQ13352 177 aaPredicted RBP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 GPM6BQ13491 265 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 NEDD9Q14511 834 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 SF3B4Q15427 424 aaKnown RBP eCLIP2.44□□□□□ -2.023e-8■■■■□ 24.1
SMARCB1-208ENST00000634926 DUSP6Q16828 381 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 PNLIPRP3Q17RR3 467 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 Q5PR19 223 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 ARHGEF16Q5VV41 709 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 HIST2H2BDQ6DRA6 164 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 SIGIRRQ6IA17 410 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 ANKRD54Q6NXT1 300 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 METTL2BQ6P1Q9 378 aaKnown RBP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 ZNF793Q6ZN11 406 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 MTSS1LQ765P7 747 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 DPPA4Q7L190 304 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 TAOK1Q7L7X3 1001 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 CHST3Q7LGC8 479 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 CACNA2D4Q7Z3S7 1137 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 GUF1Q8N442 669 aaKnown RBP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 MCUQ8NE86 351 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 Q8NFD4 153 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 OR8K5Q8NH50 307 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 SLC35F5Q8WV83 523 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 SEPT8Q92599 483 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 NEUROG1Q92886 237 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 SLC25A28Q96A46 364 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 VPS33AQ96AX1 596 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 ARSGQ96EG1 525 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 METTL2AQ96IZ6 378 aaKnown RBP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 EGLN2Q96KS0 407 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 CFAP57Q96MR6 1250 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 DACH2Q96NX9 599 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 NUDCD1Q96RS6 583 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 GAD1Q99259 594 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 ACOX2Q99424 681 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 SH3GL2Q99962 352 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 PCGF1Q9BSM1 259 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 TMEM204Q9BSN7 226 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 CCDC106Q9BWC9 280 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 MMP27Q9H306 513 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 ESRP2Q9H6T0 727 aaKnown RBP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 MAGIXQ9H6Y5 334 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 CWH43Q9H720 699 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 HINT3Q9NQE9 182 aaKnown RBP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 MRGBPQ9NV56 204 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 ARGLU1Q9NWB6 273 aaPredicted RBP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 CISD1Q9NZ45 108 aaKnown RBP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 SELENONQ9NZV5 590 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 MSRB1Q9NZV6 116 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 CRNNQ9UBG3 495 aaPredicted RBP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 AMACRQ9UHK6 382 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 BARX2Q9UMQ3 279 aaPredicted RBP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 ZNF148Q9UQR1 794 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 WBP11Q9Y2W2 641 aaKnown RBP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 RAI2Q9Y5P3 530 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 CLIC4Q9Y696 253 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 COL1A2P08123 1366 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 MIA3Q5JRA6 1907 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 MTCL1Q9Y4B5 1905 aaKnown RBP2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 IGF2RP11717 2491 aa2.44□□□□□ -2.02
SMARCB1-208ENST00000634926 MYO10Q9HD67 2058 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 TSC2P49815 1807 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 KIAA1549LQ6ZVL6 1849 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 NBPF19A0A087WUL8 3843 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 PRR23AA6NEV1 266 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 URADA6NGE7 173 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 E7EWF7 191 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 HIP1O00291 1037 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 VCYO14598 125 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 MAP2K7O14733 419 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 WNT9BO14905 357 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 SMAD9O15198 467 aaKnown RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 PDGFBP01127 241 aaPredicted RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 IGHDP01880 384 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 FYNP06241 537 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 POLR2MP0CAP2 368 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 FGF3P11487 239 aaPredicted RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 GNLYP22749 145 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 CPT2P23786 658 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 CHMLP26374 656 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 CD52P31358 61 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 CTNNA1P35221 906 aaKnown RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 MSH2P43246 934 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 COMPP49747 757 aaPredicted RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 CCR3P51677 355 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 ARSEP51690 589 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 TMPRSS3P57727 454 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 ECT2LQ008S8 904 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms