RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 TMEM191CA6NGB0 347 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 FAM177BA6PVY3 158 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 ZNF785A8K8V0 405 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 MAGEB17A8MXT2 336 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 MAGEB2O15479 319 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 GRID2O43424 1007 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 IFNA14P01570 189 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 CSF1RP07333 972 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 H2AFB2P0C5Z0 115 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 TMEM191BP0C7N4 346 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 PLA2G4BP0C869 781 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 SPATA31D3P0C874 917 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 NQO2P16083 231 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 IGFBP2P18065 325 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 LBPP18428 481 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 POLR2CP19387 275 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-213ENST00000630925 FPR1P21462 350 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 RBL1P28749 1068 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 CD80P33681 288 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 NAA10P41227 235 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-213ENST00000630925 GRIA1P42261 906 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 SLC9A3P48764 834 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 GMPSP49915 693 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-213ENST00000630925 MVDP53602 400 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 NCKAP1LP55160 1127 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 RIPK4P57078 832 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 HNRNPKP61978 463 aaKnown RBP eCLIP4.72□□□□□ -1.65
SDCBP-213ENST00000630925 CSNK1G2P78368 415 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 PRR20EP86478 221 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 PRR20CP86479 221 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 PRR20DP86480 221 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 PRR20BP86481 221 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 PRR20AP86496 221 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 SKIDA1Q1XH10 827 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 P3H1Q32P28 736 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 ALKBH6Q3KRA9 238 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 EOGTQ5NDL2 527 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 TXNRD3NBQ6F5E7 133 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 TMEM211Q6ICI0 200 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 PAOXQ6QHF9 649 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 SPATA31D4Q6ZUB0 917 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 KCTD8Q6ZWB6 473 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 GPR180Q86V85 440 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 CCDC25Q86WR0 208 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 UBQLNLQ8IYU4 475 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 GPRC5AQ8NFJ5 357 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 DNERQ8NFT8 737 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 ING5Q8WYH8 240 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 ULK4Q96C45 1275 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 SERAC1Q96JX3 654 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 CNPY3Q9BT09 278 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 PRRG3Q9BZD7 231 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 SIRPDQ9H106 197 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 OR51V1Q9H2C8 321 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 TMEM245Q9H330 911 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 TOR3AQ9H497 397 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 LRRC4Q9HBW1 653 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 VAT1LQ9HCJ6 419 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 PAK6Q9NQU5 681 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-213ENST00000630925 TLR9Q9NR96 1032 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 PNO1Q9NRX1 252 aaKnown RBP4.72□□□□□ -1.65
SDCBP-213ENST00000630925 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.72□□□□□ -1.65
SDCBP-213ENST00000630925 SLCO1C1Q9NYB5 712 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 NKIRAS1Q9NYS0 192 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 HACD3Q9P035 362 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 CNOT8Q9UFF9 292 aaKnown RBP4.72□□□□□ -1.65
SDCBP-213ENST00000630925 PCDHB7Q9Y5E2 793 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 PCDHGC4Q9Y5F7 938 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 CACNG2Q9Y698 323 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 SF3B1O75533 1304 aaKnown RBP eCLIP4.72□□□□□ -1.651e-6■■■■■ 66.8
SDCBP-213ENST00000630925 FYCO1Q9BQS8 1478 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 TULP4Q9NRJ4 1543 aa4.72□□□□□ -1.65
SDCBP-213ENST00000630925 GCC2Q8IWJ2 1684 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 A0A1B0GUH1 482 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 CGB1A6NKQ9 187 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 H0YIG0 161 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 ACOT7O00154 380 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 ABCD4O14678 606 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 ITGB1BP1O14713 200 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 TM4SF5O14894 197 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 DHX15O43143 795 aaKnown RBP4.71□□□□□ -1.65
SDCBP-213ENST00000630925 COCHO43405 550 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 IDH3BO43837 385 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 FCMRO60667 390 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 JAK2O60674 1132 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 WDR47O94967 919 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 GSTM1P09488 218 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 HSMCR30P0CW71 290 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 PEPDP12955 493 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 POLR2EP19388 210 aaKnown RBP4.71□□□□□ -1.65
SDCBP-213ENST00000630925 UGT1A1P22309 533 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 GLDCP23378 1020 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 DNASE1P24855 282 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 KLRC2P26717 231 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 PSMB6P28072 239 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 CD40LGP29965 261 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 ALDH3A1P30838 453 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 HMGCLP35914 325 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 FDFT1P37268 417 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 CDC34P49427 236 aaPredicted RBP4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms