RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 KLHL20Q9Y2M5 609 aa16.11■□□□□ 0.17
UBE3D-208ENST00000626828 IGSF10Q6WRI0 2623 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 ESYT3A0FGR9 886 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 KRT87PA6NCN2 255 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 MEN1O00255 615 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 OR2B3O76000 313 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 SLC16A8O95907 504 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 HIST1H2AGP0C0S8 130 aaPredicted RBP16.1■□□□□ 0.17
UBE3D-208ENST00000626828 HIST1H2ADP20671 130 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 CMPK1P30085 196 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 RPA3P35244 121 aaPredicted RBP16.1■□□□□ 0.17
UBE3D-208ENST00000626828 GPX6P59796 221 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 FCRL6Q6DN72 434 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 TLDC1Q6P9B6 456 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 SPNS2Q8IVW8 549 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 SYTL1Q8IYJ3 562 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 NKAPQ8N5F7 415 aaKnown RBP16.1■□□□□ 0.17
UBE3D-208ENST00000626828 SLC38A9Q8NBW4 561 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 OR2L3Q8NG85 312 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 ZNF480Q8WV37 535 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 LINGO1Q96FE5 620 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 WBP1Q96G27 269 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 HIST1H2AHQ96KK5 128 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 MIPEPQ99797 713 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 HIST1H2AJQ99878 128 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 H2AFJQ9BTM1 129 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 GPR87Q9BY21 358 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 TRIM54Q9BYV2 358 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 SPRTNQ9H040 489 aaPredicted RBP16.1■□□□□ 0.17
UBE3D-208ENST00000626828 LRRC4CQ9HCJ2 640 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 SMYD2Q9NRG4 433 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 ZDHHC18Q9NUE0 388 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 EURLQ9NYK6 297 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 IL17BQ9UHF5 180 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 DMGDHQ9UI17 866 aaKnown RBP16.1■□□□□ 0.17
UBE3D-208ENST00000626828 CROTQ9UKG9 612 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 KLK4Q9Y5K2 254 aa16.1■□□□□ 0.17
UBE3D-208ENST00000626828 FAM95CA0A1B0GW59 222 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 TCRBV9S1A1TA0A576 114 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 FAM159BA6NKW6 160 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 C21orf140B9A014 251 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 E7ENX8 843 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 ERVH48-1M5A8F1 160 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 ZNF749O43361 778 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 SRPX2O60687 465 aaPredicted RBP16.09■□□□□ 0.17
UBE3D-208ENST00000626828 RECKO95980 971 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 SAT1P21673 171 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 RPS15P62841 145 aaKnown RBP16.09■□□□□ 0.17
UBE3D-208ENST00000626828 TAP2Q03519 686 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 PRDX1Q06830 199 aaKnown RBP16.09■□□□□ 0.17
UBE3D-208ENST00000626828 SP140Q13342 867 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 TSTA3Q13630 321 aaPredicted RBP16.09■□□□□ 0.17
UBE3D-208ENST00000626828 CRTC2Q53ET0 693 aaPredicted RBP16.09■□□□□ 0.17
UBE3D-208ENST00000626828 PRAMEF17Q5VTA0 474 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 SUSD1Q6UWL2 747 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 ZNF517Q6ZMY9 492 aaPredicted RBP16.09■□□□□ 0.17
UBE3D-208ENST00000626828 NOA1Q8NC60 698 aaKnown RBP16.09■□□□□ 0.17
UBE3D-208ENST00000626828 ANKRD7Q92527 254 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 DLG3Q92796 817 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 MR1Q95460 341 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 OLFM1Q99784 485 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 CPNE1Q99829 537 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 MCMBPQ9BTE3 642 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 ACAT2Q9BWD1 397 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 AKIRIN1Q9H9L7 192 aaPredicted RBP16.09■□□□□ 0.17
UBE3D-208ENST00000626828 UTP6Q9NYH9 597 aaKnown RBP16.09■□□□□ 0.17
UBE3D-208ENST00000626828 MTRF1LQ9UGC7 380 aaKnown RBP16.09■□□□□ 0.17
UBE3D-208ENST00000626828 RALYQ9UKM9 306 aaKnown RBP16.09■□□□□ 0.17
UBE3D-208ENST00000626828 PDE10AQ9Y233 779 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 PCDHGA6Q9Y5G7 932 aa16.09■□□□□ 0.17
UBE3D-208ENST00000626828 CXorf49A8MYA2 514 aaPredicted RBP16.08■□□□□ 0.16
UBE3D-208ENST00000626828 H3BMH7 237 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 TERTO14746 1132 aaKnown RBP16.08■□□□□ 0.16
UBE3D-208ENST00000626828 HCRTR1O43613 425 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 KATNA1O75449 491 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 CCNDBP1O95273 360 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 TSPAN12O95859 305 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 ITGB2P05107 769 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 F8A1P23610 371 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 PSMB5P28074 263 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 SLC12A2P55011 1212 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 TAS2R39P59534 338 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 ABATP80404 500 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 POU4F1Q01851 419 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 GPS2Q13227 327 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 DNASE1L3Q13609 305 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 TCTE1Q5JU00 501 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 GRTP1Q5TC63 336 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 FAM199XQ6PEV8 388 aaPredicted RBP16.08■□□□□ 0.16
UBE3D-208ENST00000626828 CTAGE3PQ8IX95 158 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 DSELQ8IZU8 1212 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 CT55Q8WUE5 264 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 CATSPER2Q96P56 530 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 DPH2Q9BQC3 489 aaPredicted RBP16.08■□□□□ 0.16
UBE3D-208ENST00000626828 DPH7Q9BTV6 452 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 MRPS30Q9NP92 439 aaKnown RBP16.08■□□□□ 0.16
UBE3D-208ENST00000626828 IRAK4Q9NWZ3 460 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 ADAMTS6Q9UKP5 1117 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 SNX7Q9UNH6 387 aa16.08■□□□□ 0.16
UBE3D-208ENST00000626828 FARSAQ9Y285 508 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms