RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 ADPRHL2Q9NX46 363 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 CNIH4Q9P003 139 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 CACNG4Q9UBN1 327 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 TAF1P21675 1872 aa4.54□□□□□ -1.68
CPNE3-213ENST00000622183 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 DENND3A2RUS2 1198 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 TRIM64A6NGJ6 449 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 TRIM64BA6NI03 449 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 SDR42E2A6NKP2 422 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 C16orf97H3BN30 126 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 OVOL3O00110 214 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 PRKNO60260 465 aaPredicted RBP4.53□□□□□ -1.68
CPNE3-213ENST00000622183 SNX3O60493 162 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 PRAF2O60831 178 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 PRKRAO75569 313 aaKnown RBP4.53□□□□□ -1.68
CPNE3-213ENST00000622183 PLGP00747 810 aaPredicted RBP4.53□□□□□ -1.68
CPNE3-213ENST00000622183 FGF3P11487 239 aaPredicted RBP4.53□□□□□ -1.68
CPNE3-213ENST00000622183 CETPP11597 493 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 EPORP19235 508 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 ITIH1P19827 911 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 NR1D1P20393 614 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 CA4P22748 312 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 EPHA2P29317 976 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 VAMP7P51809 220 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 SNU13P55769 128 aaKnown RBP4.53□□□□□ -1.68
CPNE3-213ENST00000622183 C17orf67Q0P5P2 114 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 PPP2R5CQ13362 524 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 RCN2Q14257 317 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 PHKG1Q16816 387 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 UGP2Q16851 508 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 KBTBD12Q3ZCT8 623 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 ZNF789Q5FWF6 425 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 CCDC158Q5M9N0 1113 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 CCNYL2Q5T2Q4 361 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 ANO5Q75V66 913 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 NFE4Q86UQ8 179 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 LGI2Q8N0V4 545 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 KBTBD3Q8NAB2 608 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 POC1AQ8NBT0 407 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 LMO3Q8TAP4 145 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 PHLDA1Q8WV24 401 aaPredicted RBP4.53□□□□□ -1.68
CPNE3-213ENST00000622183 SEPT1Q8WYJ6 367 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 CENPTQ96BT3 561 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 ST6GAL2Q96JF0 529 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 WACQ9BTA9 647 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 SDR39U1Q9NRG7 319 aaPredicted RBP4.53□□□□□ -1.68
CPNE3-213ENST00000622183 CWC25Q9NXE8 425 aaPredicted RBP4.53□□□□□ -1.68
CPNE3-213ENST00000622183 SLCO1C1Q9NYB5 712 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 ACAD8Q9UKU7 415 aa4.53□□□□□ -1.68
CPNE3-213ENST00000622183 ANKRD61A6NGH8 418 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 SMTNL1A8MU46 457 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 O00370 1275 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 SLC16A8O95907 504 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 NR3C1P04150 777 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 EFNA1P20827 205 aaPredicted RBP4.52□□□□□ -1.69
CPNE3-213ENST00000622183 CCND3P30281 292 aaPredicted RBP4.52□□□□□ -1.69
CPNE3-213ENST00000622183 FRKP42685 505 aaPredicted RBP4.52□□□□□ -1.69
CPNE3-213ENST00000622183 CDH11P55287 796 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 B3GALT5-AS1P59052 145 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 STX1BP61266 288 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 ST8SIA6P61647 398 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 TAF10Q12962 218 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 DCAF10Q5QP82 559 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 ZNF324BQ6AW86 544 aaPredicted RBP4.52□□□□□ -1.69
CPNE3-213ENST00000622183 OR4A47Q6IF82 309 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 PLBD1Q6P4A8 553 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 SPSB3Q6PJ21 355 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 IL17RELQ6ZVW7 336 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 RAPH1Q70E73 1250 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 AMIGO1Q86WK6 493 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 ZDHHC17Q8IUH5 632 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 SIAH3Q8IW03 269 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 CDK20Q8IZL9 346 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 CLYBLQ8N0X4 340 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 MAPKAPK5-AS1Q8N8E1 139 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 NAT8LQ8N9F0 302 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 SPC24Q8NBT2 197 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 NOA1Q8NC60 698 aaKnown RBP4.52□□□□□ -1.69
CPNE3-213ENST00000622183 SLC24A4Q8NFF2 622 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 OR10Q1Q8NGQ4 319 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 OR13A1Q8NGR1 328 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 SNRNP40Q96DI7 357 aaKnown RBP4.52□□□□□ -1.69
CPNE3-213ENST00000622183 CCDC43Q96MW1 224 aaKnown RBP4.52□□□□□ -1.69
CPNE3-213ENST00000622183 PKP4Q99569 1192 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 HNRNPABQ99729 332 aaKnown RBP4.52□□□□□ -1.69
CPNE3-213ENST00000622183 URM1Q9BTM9 101 aaKnown RBP4.52□□□□□ -1.69
CPNE3-213ENST00000622183 ZMYND12Q9H0C1 365 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 TFB2MQ9H5Q4 396 aaKnown RBP4.52□□□□□ -1.69
CPNE3-213ENST00000622183 TLE6Q9H808 572 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 STUB1Q9UNE7 303 aa4.52□□□□□ -1.69
CPNE3-213ENST00000622183 FAF1Q9UNN5 650 aaPredicted RBP4.52□□□□□ -1.69
CPNE3-213ENST00000622183 LOC101059948A0A1B0GTJ6 334 aa4.51□□□□□ -1.69
CPNE3-213ENST00000622183 C2orf81A6NN90 581 aa4.51□□□□□ -1.69
CPNE3-213ENST00000622183 ACOT8O14734 319 aa4.51□□□□□ -1.69
CPNE3-213ENST00000622183 CDH3P22223 829 aa4.51□□□□□ -1.69
CPNE3-213ENST00000622183 CD27P26842 260 aa4.51□□□□□ -1.69
CPNE3-213ENST00000622183 MAZP56270 477 aaKnown RBP4.51□□□□□ -1.69
CPNE3-213ENST00000622183 UBXN1Q04323 297 aa4.51□□□□□ -1.69
CPNE3-213ENST00000622183 RASGEF1BQ0VAM2 473 aa4.51□□□□□ -1.69
CPNE3-213ENST00000622183 NONOQ15233 471 aaKnown RBP eCLIP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms