RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 GOLGA8CPA6NN73 597 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 E9PQ18 207 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 TAF4O00268 1085 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 TBX1O43435 398 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 NUAK1O60285 661 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 PCDHGA12O60330 932 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 ACSL4O60488 711 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 PRAMEF12O95522 483 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 THPOP40225 353 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 GJA8P48165 433 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 CDH4P55283 916 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 TUBA1BP68363 451 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 CREMQ03060 361 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 SF3B4Q15427 424 aaKnown RBP eCLIP19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 CARTPTQ16568 116 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 SYT16Q17RD7 645 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 TTLL9Q3SXZ7 439 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 PRSS36Q5K4E3 855 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 TUBA3EQ6PEY2 450 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 TUBA1AQ71U36 451 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 ZNF598Q86UK7 904 aaKnown RBP19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 BOCQ9BWV1 1114 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 SIRT5Q9NXA8 310 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 UGT2A1Q9Y4X1 527 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 NUP214P35658 2090 aaPredicted RBP19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 FABP3P05413 133 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 SPNP16150 400 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 RGS4P49798 205 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 LRIT3Q3SXY7 679 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 GALNT10Q86SR1 603 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 ELMOD1Q8N336 334 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 ULK4Q96C45 1275 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 CLPBQ9H078 707 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 PARVBQ9HBI1 364 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 PRSS21Q9Y6M0 314 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 CENPFP49454 3210 aa19.06■□□□□ 0.64
PDLIM3-212ENST00000620787 SAGE2PA6NJ88 616 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 RFPL2O75678 378 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 BMP1P13497 986 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 CLK1P49759 484 aaKnown RBP19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 VTCN1Q7Z7D3 282 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 HORMAD1Q86X24 394 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 SLC22A15Q8IZD6 547 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 POC5Q8NA72 575 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 DNASE1L2Q92874 299 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 SLC29A3Q9BZD2 475 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 HOXD1Q9GZZ0 328 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 EHD1Q9H4M9 534 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 AASDHPPTQ9NRN7 309 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 KIF17Q9P2E2 1029 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 SCN8AQ9UQD0 1980 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 M0R082 166 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 CBX4O00257 560 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 INPPL1O15357 1258 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 AIREO43918 545 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 RPS3P23396 243 aaKnown RBP eCLIP19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 TACR1P25103 407 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 SEPHS1P49903 392 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 RPP38P78345 283 aaKnown RBP19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 FAHD1Q6P587 224 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 MBOAT1Q6ZNC8 495 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 SERPINA9Q86WD7 417 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 ENTHD1Q8IYW4 607 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 FAM83FQ8NEG4 500 aaPredicted RBP19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 TSSK3Q96PN8 268 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 NACA2Q9H009 215 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 NOD1Q9Y239 953 aa19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 SAMHD1Q9Y3Z3 626 aaKnown RBP19.05■□□□□ 0.64
PDLIM3-212ENST00000620787 SNPHO15079 494 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 PDYNP01213 254 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 EPB42P16452 691 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 S100A1P23297 94 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 SGSHP51688 502 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 GNASQ5JWF2 1037 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 SERPINA11Q86U17 422 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 PGBD3Q8N328 593 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 BEND7Q8N7W2 519 aaPredicted RBP19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 ATG16L2Q8NAA4 619 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 CRISPLD1Q9H336 500 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 TESMINQ9Y4I5 508 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 FRMPD3Q5JV73 1810 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 GAPDHSO14556 408 aaPredicted RBP19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 SLC25A14O95258 325 aaPredicted RBP19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 DLGAP3O95886 979 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 RHOCP08134 193 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 ZNF7P17097 686 aaPredicted RBP19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 DGKAP23743 735 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 GADD45AP24522 165 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 DSC1Q08554 894 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 NPRL3Q12980 569 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 ZCCHC8Q6NZY4 707 aaKnown RBP19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 FAM151BQ6UXP7 276 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 CERS6Q6ZMG9 384 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 ZZZ3Q8IYH5 903 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 TESCQ96BS2 214 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 NXF2Q9GZY0 626 aaKnown RBP19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 PRDM8Q9NQV8 689 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 IFT52Q9Y366 437 aa19.04■□□□□ 0.64
PDLIM3-212ENST00000620787 RFXANKO14593 260 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 CD160O95971 181 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms