RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 FAM83HQ6ZRV2 1179 aaPredicted RBP7.31□□□□□ -1.24
CBWD1-228ENST00000619157 PHYKPLQ8IUZ5 450 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 PRELID2Q8N945 189 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 RASGEF1AQ8N9B8 481 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 DDHD1Q8NEL9 900 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 TRIM58Q8NG06 486 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 OR4K2Q8NGD2 314 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 BRSK1Q8TDC3 778 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 NXPE2Q96DL1 559 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 DNAJC1Q96KC8 554 aaKnown RBP7.31□□□□□ -1.24
CBWD1-228ENST00000619157 DEPDC7Q96QD5 511 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 SRPK1Q96SB4 655 aaKnown RBP7.31□□□□□ -1.24
CBWD1-228ENST00000619157 SYNDIG1Q9H7V2 258 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 RDH14Q9HBH5 336 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 PRDM8Q9NQV8 689 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 KLC4Q9NSK0 619 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 SMOXQ9NWM0 555 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 HACD3Q9P035 362 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 ZNF624Q9P2J8 865 aaPredicted RBP7.31□□□□□ -1.24
CBWD1-228ENST00000619157 SATB2Q9UPW6 733 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 WDR37Q9Y2I8 494 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 AAR2Q9Y312 384 aaKnown RBP7.31□□□□□ -1.24
CBWD1-228ENST00000619157 BSNQ9UPA5 3926 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 ATMQ13315 3056 aa7.31□□□□□ -1.24
CBWD1-228ENST00000619157 PTPRQQ9UMZ3 2332 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 IGHV1OR21-1A0A087WYE8 117 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 TRBV5-4A0A0C4DH59 114 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 CCDC78A2IDD5 438 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 GOLGA6L3A6NEY3 463 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 STX7O15400 261 aaKnown RBP7.3□□□□□ -1.24
CBWD1-228ENST00000619157 VEGFDO43915 354 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 SNX2O60749 519 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 SRP72O76094 671 aaKnown RBP7.3□□□□□ -1.24
CBWD1-228ENST00000619157 SUN1O94901 812 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 CDK14O94921 469 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 ZNF7P17097 686 aaPredicted RBP7.3□□□□□ -1.24
CBWD1-228ENST00000619157 LPOP22079 712 aaPredicted RBP7.3□□□□□ -1.24
CBWD1-228ENST00000619157 RPL22P35268 128 aaKnown RBP7.3□□□□□ -1.24
CBWD1-228ENST00000619157 EIF2S3P41091 472 aaKnown RBP7.3□□□□□ -1.24
CBWD1-228ENST00000619157 ETV5P41161 510 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 FASLGP48023 281 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 LSSP48449 732 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 CLCNKAP51800 687 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 DRG2P55039 364 aaKnown RBP7.3□□□□□ -1.24
CBWD1-228ENST00000619157 GABREP78334 506 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 TMPRSS15P98073 1019 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 SEMA5AQ13591 1074 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 SPIDRQ14159 915 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 POU6F1Q14863 301 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 C16orf72Q14CZ0 275 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 TBC1D25Q3MII6 688 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 ZNF658BQ4V348 819 aaPredicted RBP7.3□□□□□ -1.24
CBWD1-228ENST00000619157 CCDC38Q502W7 563 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 C3orf38Q5JPI3 329 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 TMEM200BQ69YZ2 307 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 CCDC70Q6NSX1 233 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 DRICH1Q6PGQ1 229 aaPredicted RBP7.3□□□□□ -1.24
CBWD1-228ENST00000619157 C19orf48Q6RUI8 117 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 ZNF534Q76KX8 674 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 MTDHQ86UE4 582 aaKnown RBP7.3□□□□□ -1.24
CBWD1-228ENST00000619157 LRRTM4Q86VH4 590 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 PIANPQ8IYJ0 282 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 SLC35F6Q8N357 371 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 RASGEF1CQ8N431 466 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 LILRA3Q8N6C8 439 aaPredicted RBP7.3□□□□□ -1.24
CBWD1-228ENST00000619157 OR52K1Q8NGK4 314 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 GPR150Q8NGU9 434 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 WDR48Q8TAF3 677 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 ZNF398Q8TD17 642 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 SGSM3Q96HU1 749 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 MS4A14Q96JA4 679 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 ZNF778Q96MU6 729 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 GFM1Q96RP9 751 aaKnown RBP7.3□□□□□ -1.24
CBWD1-228ENST00000619157 BTBD2Q9BX70 525 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 ABCG4Q9H172 646 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 FAM96AQ9H5X1 160 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 LRRC40Q9H9A6 602 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 RMI1Q9H9A7 625 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 POLR1BQ9H9Y6 1135 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 OGFRQ9NZT2 677 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 SLC2A6Q9UGQ3 507 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 DNAJC16Q9Y2G8 782 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 FAM208BQ5VWN6 2430 aa7.3□□□□□ -1.24
CBWD1-228ENST00000619157 URB1O60287 2271 aaKnown RBP7.3□□□□□ -1.24
CBWD1-228ENST00000619157 CFAP46Q8IYW2 2715 aa7.29□□□□□ -1.24
CBWD1-228ENST00000619157 KALRNO60229 2985 aa7.29□□□□□ -1.24
CBWD1-228ENST00000619157 IGLV3-16A0A075B6K0 115 aa7.29□□□□□ -1.24
CBWD1-228ENST00000619157 A0A087WV48 116 aa7.29□□□□□ -1.24
CBWD1-228ENST00000619157 IGHV5-10-1A0A0J9YXX1 117 aa7.29□□□□□ -1.24
CBWD1-228ENST00000619157 TCRBV7S3A2A0A539 114 aa7.29□□□□□ -1.24
CBWD1-228ENST00000619157 OR51F1A6NGY5 319 aa7.29□□□□□ -1.24
CBWD1-228ENST00000619157 OR2AG2A6NM03 316 aa7.29□□□□□ -1.24
CBWD1-228ENST00000619157 OR52A4PA6NMU1 304 aa7.29□□□□□ -1.24
CBWD1-228ENST00000619157 C2orf81A6NN90 581 aa7.29□□□□□ -1.24
CBWD1-228ENST00000619157 CDRT15L2A8MXV6 281 aa7.29□□□□□ -1.24
CBWD1-228ENST00000619157 H7C0S8 307 aa7.29□□□□□ -1.24
CBWD1-228ENST00000619157 CEP104O60308 925 aa7.29□□□□□ -1.24
CBWD1-228ENST00000619157 STK10O94804 968 aaKnown RBP7.29□□□□□ -1.24
CBWD1-228ENST00000619157 IFNB1P01574 187 aa7.29□□□□□ -1.24
CBWD1-228ENST00000619157 F3P13726 295 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms