RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 LRRC20Q8TCA0 184 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 CSGALNACT1Q8TDX6 532 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 BARD1Q99728 777 aaKnown RBP20.05■□□□□ 0.8
PCSK6-217ENST00000618548 TXNRD2Q9NNW7 524 aa20.05■□□□□ 0.8
PCSK6-217ENST00000618548 UBFD1O14562 309 aaKnown RBP20.04■□□□□ 0.8
PCSK6-217ENST00000618548 SLITRK5O94991 958 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 CCNYL3P0C7X3 344 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 CD72P21854 359 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 FDXRP22570 491 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 TUSC3Q13454 348 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 RFTN2Q52LD8 501 aaPredicted RBP20.04■□□□□ 0.8
PCSK6-217ENST00000618548 ANXA8L1Q5VT79 327 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 CDK5RAP1Q96SZ6 601 aaKnown RBP20.04■□□□□ 0.8
PCSK6-217ENST00000618548 NMUR1Q9HB89 426 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 DNMT3LQ9UJW3 386 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 CATP04040 527 aaKnown RBP20.04■□□□□ 0.8
PCSK6-217ENST00000618548 SEMG2Q02383 582 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 C5orf22Q49AR2 442 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 IFI44LQ53G44 452 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 KCTD11Q693B1 232 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 LAPTM4BQ86VI4 370 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 A6NL46 340 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 DNTTP04053 509 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 GRSF1Q12849 480 aaKnown RBP eCLIP20.04■□□□□ 0.8
PCSK6-217ENST00000618548 CRTC2Q53ET0 693 aaPredicted RBP20.04■□□□□ 0.8
PCSK6-217ENST00000618548 TAPT1Q6NXT6 567 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 ERAP2Q6P179 960 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 ELMOD2Q8IZ81 293 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 DNAJC11Q9NVH1 559 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 NKIRAS2Q9NYR9 191 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 CDH7Q9ULB5 785 aa20.04■□□□□ 0.8
PCSK6-217ENST00000618548 COL4A1P02462 1669 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 SEC14L2O76054 403 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 GADD45GO95257 159 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 DHFRP00374 187 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 HNRNPFP52597 415 aaKnown RBP20.03■□□□□ 0.8
PCSK6-217ENST00000618548 SMN1Q16637 294 aaKnown RBP20.03■□□□□ 0.8
PCSK6-217ENST00000618548 RNASE12Q5GAN4 147 aaKnown RBP20.03■□□□□ 0.8
PCSK6-217ENST00000618548 RHOXF1Q8NHV9 184 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 NEURL2Q9BR09 285 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 OSBPL10Q9BXB5 764 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 CCDC59Q9P031 241 aaKnown RBP20.03■□□□□ 0.8
PCSK6-217ENST00000618548 PCDHB14Q9Y5E9 798 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 PTSQ03393 145 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 NPRL3Q12980 569 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 ADARB2Q9NS39 739 aaKnown RBP20.03■□□□□ 0.8
PCSK6-217ENST00000618548 UCKL1Q9NWZ5 548 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 MIOSQ9NXC5 875 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 SCN7AQ01118 1682 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 ZSCAN5BA6NJL1 495 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 CCNB2O95067 398 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 KCNE1P15382 129 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 SDC2P34741 201 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 ARCN1P48444 511 aaKnown RBP20.03■□□□□ 0.8
PCSK6-217ENST00000618548 KCNC1P48547 511 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 FAM189BP81408 668 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 HDDC2Q7Z4H3 204 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 IL37Q9NZH6 218 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 PCDHA9Q9Y5H5 950 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 MAST2Q6P0Q8 1798 aa20.03■□□□□ 0.8
PCSK6-217ENST00000618548 IFNW1P05000 195 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 ALDH2P05091 517 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 ERVPABLB-1P60509 514 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 SRSF11Q05519 484 aaKnown RBP20.02■□□□□ 0.8
PCSK6-217ENST00000618548 AGAP7PQ5VUJ5 663 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 VTCN1Q7Z7D3 282 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 RGL4Q8IZJ4 473 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 DNAJB8Q8NHS0 232 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 FRMD6Q96NE9 622 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 ASPNQ9BXN1 380 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 FZD4Q9ULV1 537 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 PTTG1O95997 202 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 SERPINA4P29622 427 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 RPS24P62847 133 aaKnown RBP20.02■□□□□ 0.8
PCSK6-217ENST00000618548 SELPLGQ14242 412 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 OR8H3Q8N146 312 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 HJURPQ8NCD3 748 aaPredicted RBP20.02■□□□□ 0.8
PCSK6-217ENST00000618548 NETO1Q8TDF5 533 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 SGCDQ92629 289 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 ANKRA2Q9H9E1 313 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 SGK2Q9HBY8 427 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 CLEC4AQ9UMR7 237 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 PCDHGB6Q9Y5F9 930 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 GLYATL1P3A0A0U1RQE8 302 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 KIAA0513O60268 411 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 BICRALQ6AI39 1079 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 TRMT11Q7Z4G4 463 aaKnown RBP20.02■□□□□ 0.8
PCSK6-217ENST00000618548 C9orf43Q8TAL5 461 aaPredicted RBP20.02■□□□□ 0.8
PCSK6-217ENST00000618548 PPCDCQ96CD2 204 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 DUSP26Q9BV47 211 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 MED28Q9H204 178 aa20.02■□□□□ 0.8
PCSK6-217ENST00000618548 TOGARAM1Q9Y4F4 1720 aa20.02■□□□□ 0.79
PCSK6-217ENST00000618548 TSPAN4O14817 238 aa20.02■□□□□ 0.79
PCSK6-217ENST00000618548 SLC30A4O14863 429 aa20.02■□□□□ 0.79
PCSK6-217ENST00000618548 IGSF6O95976 241 aa20.02■□□□□ 0.79
PCSK6-217ENST00000618548 ATF4P18848 351 aaPredicted RBP20.02■□□□□ 0.79
PCSK6-217ENST00000618548 SMYD5Q6GMV2 418 aa20.02■□□□□ 0.79
PCSK6-217ENST00000618548 FUBP1Q96AE4 644 aaKnown RBP20.02■□□□□ 0.79
PCSK6-217ENST00000618548 TNFRSF12AQ9NP84 129 aa20.02■□□□□ 0.79
PCSK6-217ENST00000618548 KCTD5Q9NXV2 234 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms