RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 ADI1Q9BV57 179 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 LRRC2Q9BYS8 371 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 CPEB1Q9BZB8 566 aaKnown RBP3.43□□□□□ -1.86
SMC5-204ENST00000618375 ACPTQ9BZG2 426 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 TRIM2Q9C040 744 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 SLIRPQ9GZT3 109 aaKnown RBP3.43□□□□□ -1.86
SMC5-204ENST00000618375 MCOLN1Q9GZU1 580 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 NXF2Q9GZY0 626 aaKnown RBP3.43□□□□□ -1.86
SMC5-204ENST00000618375 C2orf40Q9H1Z8 148 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 RHBGQ9H310 441 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 TTYH1Q9H313 450 aaPredicted RBP3.43□□□□□ -1.86
SMC5-204ENST00000618375 COQ10BQ9H8M1 238 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 COPS7BQ9H9Q2 264 aaPredicted RBP3.43□□□□□ -1.86
SMC5-204ENST00000618375 SEBOXQ9HB31 216 aaPredicted RBP3.43□□□□□ -1.86
SMC5-204ENST00000618375 CHMP1AQ9HD42 196 aaPredicted RBP3.43□□□□□ -1.86
SMC5-204ENST00000618375 ERVK-5Q9HDB9 667 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 CRTAC1Q9NQ79 661 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 POLE4Q9NR33 117 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 ABCB10Q9NRK6 738 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 FAM49BQ9NUQ9 324 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 INTS10Q9NVR2 710 aaKnown RBP3.43□□□□□ -1.86
SMC5-204ENST00000618375 NKIRAS2Q9NYR9 191 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 COL20A1Q9P218 1284 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 COPZ2Q9P299 210 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 KLHL9Q9P2J3 617 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 GIMAP2Q9UG22 337 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 RGS17Q9UGC6 210 aaPredicted RBP3.43□□□□□ -1.86
SMC5-204ENST00000618375 MLXQ9UH92 298 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 UBQLN2Q9UHD9 624 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 ADAMTS1Q9UHI8 967 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 TRPC5Q9UL62 973 aaPredicted RBP3.43□□□□□ -1.86
SMC5-204ENST00000618375 MAGED2Q9UNF1 606 aaPredicted RBP3.43□□□□□ -1.86
SMC5-204ENST00000618375 KCNJ14Q9UNX9 436 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 RUVBL2Q9Y230 463 aaKnown RBP3.43□□□□□ -1.86
SMC5-204ENST00000618375 BTBD3Q9Y2F9 522 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 YBX2Q9Y2T7 364 aaKnown RBP3.43□□□□□ -1.86
SMC5-204ENST00000618375 PCDHB7Q9Y5E2 793 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 PCDHGA9Q9Y5G4 932 aaKnown RBP3.43□□□□□ -1.86
SMC5-204ENST00000618375 BACE2Q9Y5Z0 518 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 CDY1Q9Y6F8 540 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 U3KQ87 197 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 SPATA31A6Q5VVP1 1343 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 FRMPD2Q68DX3 1309 aaPredicted RBP3.43□□□□□ -1.86
SMC5-204ENST00000618375 ADGRA2Q96PE1 1338 aa3.43□□□□□ -1.86
SMC5-204ENST00000618375 A2ML1A8K2U0 1454 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 A0A087X0T9 212 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.42□□□□□ -1.86
SMC5-204ENST00000618375 TCRBV3S1A0A5B6 114 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 SLC22A23A1A5C7 686 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 MEIOCA2RUB1 952 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 TRIM49BA6NDI0 452 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 C2orf71A6NGG8 1288 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 RRN3P2A6NIE6 340 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 OR6C70A6NIJ9 312 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 METTL15A6NJ78 407 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 A8MXE2 369 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 A8MXK9 166 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 H7C0S8 307 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 M0R3G1 203 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 ARNTLO00327 626 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 ITGB1BP1O14713 200 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 ZNF213O14771 459 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 SCAMP1O15126 338 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 TRIM24O15164 1050 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 EPHB6O15197 1021 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 TP73O15350 636 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 PRKYO43930 277 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 RAD1O60671 282 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 SNNO75324 88 aaPredicted RBP3.42□□□□□ -1.86
SMC5-204ENST00000618375 AVILO75366 819 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 TADA2AO75478 443 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 PIAS1O75925 651 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 CABYRO75952 493 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 SNAPC5O75971 98 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 DDNO94850 711 aaPredicted RBP3.42□□□□□ -1.86
SMC5-204ENST00000618375 RAB3DO95716 219 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 TOP3BO95985 862 aaKnown RBP3.42□□□□□ -1.86
SMC5-204ENST00000618375 PAK4O96013 591 aaPredicted RBP3.42□□□□□ -1.86
SMC5-204ENST00000618375 RAF1P04049 648 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 C2P06681 752 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 IFIT1P09914 478 aaKnown RBP3.42□□□□□ -1.86
SMC5-204ENST00000618375 THEGLP0DJG4 465 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 MYCLP12524 364 aaPredicted RBP3.42□□□□□ -1.86
SMC5-204ENST00000618375 MLNP12872 115 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 ATF2P15336 505 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 CD1EP15812 388 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 DPEP1P16444 411 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 XRCC1P18887 633 aaPredicted RBP3.42□□□□□ -1.86
SMC5-204ENST00000618375 XPAP23025 273 aaPredicted RBP3.42□□□□□ -1.86
SMC5-204ENST00000618375 ME2P23368 584 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 EEF1B2P24534 225 aaKnown RBP3.42□□□□□ -1.86
SMC5-204ENST00000618375 PAX6P26367 422 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 GIFP27352 417 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 CD6P30203 668 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 SLC7A1P30825 629 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 GDI1P31150 447 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 CEACAM6P40199 344 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 RFC3P40938 356 aa3.42□□□□□ -1.86
SMC5-204ENST00000618375 CRKLP46109 303 aaKnown RBP3.42□□□□□ -1.86
SMC5-204ENST00000618375 QARSP47897 775 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms