RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 TMEM115Q12893 351 aaPredicted RBP18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 LMAN2Q12907 356 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 CILP2Q8IUL8 1156 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 Q8N9G6 341 aaPredicted RBP18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 RNF31Q96EP0 1072 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 GPR22Q99680 433 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 XRN1Q8IZH2 1706 aaKnown RBP18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 CACNA1FO60840 1977 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 B4GALT2O60909 372 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 DGKQP52824 942 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 GPX6P59796 221 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 OR4F3Q6IEY1 312 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 IQCHQ86VS3 1027 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 ZZZ3Q8IYH5 903 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 CMTR2Q8IYT2 770 aaKnown RBP18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 NXPE1Q8N323 547 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 AVL9Q8NBF6 648 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 OR4F6Q8NGB9 312 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 TSEN15Q8WW01 171 aaKnown RBP18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 COX4I2Q96KJ9 171 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 GINS4Q9BRT9 223 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 OR51B5Q9H339 312 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 C11orf16Q9NQ32 467 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 KLK3P07288 261 aaPredicted RBP18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 EIF2B2P49770 351 aaKnown RBP18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 SEMA3AQ14563 771 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 WDR45BQ5MNZ6 344 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 ERN2Q76MJ5 926 aaKnown RBP18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 GPRIN1Q7Z2K8 1008 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 GPATCH1Q9BRR8 931 aaKnown RBP18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 TAS2R1Q9NYW7 299 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 MOCS1Q9NZB8 636 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 PLAGL1Q9UM63 463 aa18.08■□□□□ 0.48
AC008878.3-201ENST00000617428 JUNP05412 331 aaKnown RBP18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 HNRNPA1P09651 372 aaKnown RBP eCLIP18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 CBSLP0DN79 551 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 PSMA1P25786 263 aaKnown RBP18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 CBSP35520 551 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 LMO3Q8TAP4 145 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 IFT27Q9BW83 186 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 SFXN1Q9H9B4 322 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 SLC35C2Q9NQQ7 365 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 CLIC1O00299 241 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 PSIP1O75475 530 aaKnown RBP18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 HOXA11P31270 313 aaPredicted RBP18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 CSTF2P33240 577 aaKnown RBP eCLIP18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 PPP2R2BQ00005 443 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 TARDBPQ13148 414 aaKnown RBP eCLIP18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 DENND5AQ6IQ26 1287 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 IKBIPQ70UQ0 350 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 IGSF8Q969P0 613 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 DGAT2Q96PD7 388 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 CADM1Q9BY67 442 aaKnown RBP18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 LRRC3Q9BY71 257 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 TRIM8Q9BZR9 551 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 SPATA7Q9P0W8 599 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 POMPQ9Y244 141 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 A0A1W2PP55 124 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 ADH1BP00325 375 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 DLG1Q12959 904 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 SLC35A5Q9BS91 424 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 PCDHAC1Q9H158 963 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 SLCO3A1Q9UIG8 710 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 TMEM59LQ9UK28 342 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 LCHNA4D1U4 455 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 HEPACAM2A8MVW5 462 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 TCEA3O75764 348 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 GBAP04062 536 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 SGCBQ16585 318 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 SPIN4Q56A73 249 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 GKN2Q86XP6 184 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 MCFD2Q8NI22 146 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 PSKH2Q96QS6 385 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 CYP8B1Q9UNU6 501 aa18.07■□□□□ 0.48
AC008878.3-201ENST00000617428 CHST10O43529 356 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 CYBAP13498 195 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 ARFIP1P53367 373 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 MYBPC3Q14896 1274 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 DCUN1D3Q8IWE4 304 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 ZNF483Q8TF39 744 aaPredicted RBP18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 SLC25A36Q96CQ1 311 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 SIGLEC10Q96LC7 697 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 ZNF641Q96N77 438 aaPredicted RBP18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 PDCD10Q9BUL8 212 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 ZNF395Q9H8N7 513 aaPredicted RBP18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 TVP23BQ9NYZ1 205 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 KNDC1Q76NI1 1749 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 SSNA1O43805 119 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 ATP5A1P25705 553 aaKnown RBP18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 ETV3P41162 512 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 GANABQ14697 944 aaKnown RBP18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 RGS21Q2M5E4 152 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 EIPR1Q53HC9 387 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 ZNF805Q5CZA5 627 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 OR52B2Q96RD2 323 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 COMMD9Q9P000 198 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 PGLSO95336 258 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 ZNF823P16415 610 aa18.06■□□□□ 0.48
AC008878.3-201ENST00000617428 SCARB2Q14108 478 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms