RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 FAM20CQ8IXL6 584 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 PTGR2Q8N8N7 351 aaPredicted RBP15.08■□□□□ 0
PCDHGC3-204ENST00000617222 ARMC2Q8NEN0 867 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 OR4D9Q8NGE8 314 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 FLVCR1-AS1Q8TAF5 88 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 SLC22A18Q96BI1 424 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 PHF21BQ96EK2 531 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 ATP6V1G3Q96LB4 118 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 FAM111AQ96PZ2 611 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 MAP3K3Q99759 626 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 TMEM79Q9BSE2 394 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 SGPP1Q9BX95 441 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 TWSG1Q9GZX9 223 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 SEMA6CQ9H3T2 930 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 SSU72Q9NP77 194 aaKnown RBP15.08■□□□□ 0
PCDHGC3-204ENST00000617222 INTS7Q9NVH2 962 aaKnown RBP15.08■□□□□ 0
PCDHGC3-204ENST00000617222 SLC17A7Q9P2U7 560 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 TAC3Q9UHF0 121 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 POMT2Q9UKY4 750 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 TMCO1Q9UM00 188 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 PCDHB11Q9Y5F2 797 aa15.08■□□□□ 0
PCDHGC3-204ENST00000617222 IGHV5-10-1A0A0J9YXX1 117 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 A8MU76 341 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 DLX3O60479 287 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 STK16O75716 305 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 MT-CO3P00414 261 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 GGT5P36269 586 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 LSSP48449 732 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 ALDH18A1P54886 795 aaKnown RBP15.07■□□□□ 0
PCDHGC3-204ENST00000617222 PUM1Q14671 1186 aaKnown RBP eCLIP15.07■□□□□ 0
PCDHGC3-204ENST00000617222 CACHD1Q5VU97 1274 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 PRAMEF13Q5VWM6 474 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 CDCP2Q5VXM1 449 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 SPESP1Q6UW49 350 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 ZYG11AQ6WRX3 759 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 THOC6Q86W42 341 aaKnown RBP15.07■□□□□ 0
PCDHGC3-204ENST00000617222 OR2A1Q8NGT9 310 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 MIPEPQ99797 713 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 CD244Q9BZW8 370 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 PCBD2Q9H0N5 130 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 CNOT10Q9H9A5 744 aaKnown RBP15.07■□□□□ 0
PCDHGC3-204ENST00000617222 SLC22A14Q9Y267 594 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 MN1Q10571 1320 aaPredicted RBP15.07■□□□□ 0
PCDHGC3-204ENST00000617222 UNC13CQ8NB66 2214 aa15.07■□□□□ 0
PCDHGC3-204ENST00000617222 CNOT1A5YKK6 2376 aaKnown RBP15.06■□□□□ 0
PCDHGC3-204ENST00000617222 LRRC14BA6NHZ5 514 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 A8MT66 165 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 G3V2L1 256 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 CCNT2O60583 730 aaKnown RBP15.06■□□□□ 0
PCDHGC3-204ENST00000617222 RASSF9O75901 435 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 IPO13O94829 963 aaKnown RBP15.06■□□□□ 0
PCDHGC3-204ENST00000617222 WDR47O94967 919 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 SIX3O95343 332 aaPredicted RBP15.06■□□□□ 0
PCDHGC3-204ENST00000617222 MYL2P10916 166 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 CPA3P15088 417 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 PVRP15151 417 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 NPPBP16860 134 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 CDH3P22223 829 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 CCND1P24385 295 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 ATP5F1P24539 256 aaPredicted RBP15.06■□□□□ 0
PCDHGC3-204ENST00000617222 SLC6A12P48065 614 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 INHBCP55103 352 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 YBX1P67809 324 aaKnown RBP15.06■□□□□ 0
PCDHGC3-204ENST00000617222 MPP2Q14168 576 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 SETDB1Q15047 1291 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 SLC5A12Q1EHB4 618 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 PHF19Q5T6S3 580 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 HES3Q5TGS1 186 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 LCTLQ6UWM7 567 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 B3GNT8Q7Z7M8 397 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 SLITRK4Q8IW52 837 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 PKNOX2Q96KN3 472 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 CCDC74BQ96LY2 380 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 OR4K3Q96R72 315 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 CD180Q99467 661 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 KLHL25Q9H0H3 589 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 PDP2Q9P2J9 529 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 KLHL20Q9Y2M5 609 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 ASB1Q9Y576 335 aa15.06■□□□□ 0
PCDHGC3-204ENST00000617222 IGHV5-51A0A0C4DH38 117 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 A0A0J9YY10 115 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 TLCD2A6NGC4 264 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 SLC9B1P1A6NJY1 282 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 HMGB1P1B2RPK0 211 aaPredicted RBP15.05■□□□□ -0
PCDHGC3-204ENST00000617222 STX16-NPEPL1H3BU86 382 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 AGRPO00253 132 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 STX16O14662 325 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 PRPF4O43172 522 aaKnown RBP eCLIP15.05■□□□□ -0
PCDHGC3-204ENST00000617222 THRAP10827 490 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 EEF1DP29692 281 aaKnown RBP15.05■□□□□ -0
PCDHGC3-204ENST00000617222 CMPK1P30085 196 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 HOXD11P31277 338 aaPredicted RBP15.05■□□□□ -0
PCDHGC3-204ENST00000617222 PRDX1Q06830 199 aaKnown RBP15.05■□□□□ -0
PCDHGC3-204ENST00000617222 ZFP36L1Q07352 338 aaKnown RBP15.05■□□□□ -0
PCDHGC3-204ENST00000617222 PCBP2Q15366 365 aaKnown RBP eCLIP15.05■□□□□ -0
PCDHGC3-204ENST00000617222 KIAA1614Q5VZ46 1190 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 ICE2Q659A1 982 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 ARHGAP22Q7Z5H3 698 aa15.05■□□□□ -0
PCDHGC3-204ENST00000617222 RAB44Q7Z6P3 723 aaPredicted RBP15.05■□□□□ -0
PCDHGC3-204ENST00000617222 KLHDC8AQ8IYD2 350 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms