RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 ARVCFO00192 962 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 CAPN5O15484 640 aaPredicted RBP15.17■□□□□ 0.02
GPN1-212ENST00000616939 TAPBPO15533 448 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 OR1I1O60431 355 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 PGLSO95336 258 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 PARNO95453 639 aaKnown RBP15.17■□□□□ 0.02
GPN1-212ENST00000616939 DBTP11182 482 aaKnown RBP15.17■□□□□ 0.02
GPN1-212ENST00000616939 BCKDHAP12694 445 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 CR2P20023 1033 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 RPS3P23396 243 aaKnown RBP eCLIP15.17■□□□□ 0.02
GPN1-212ENST00000616939 CXCR2P25025 360 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 HOXD9P28356 352 aaPredicted RBP15.17■□□□□ 0.02
GPN1-212ENST00000616939 GTF2E2P29084 291 aaKnown RBP15.17■□□□□ 0.02
GPN1-212ENST00000616939 DDOSTP39656 456 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 PIK3CBP42338 1070 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 CDKN1CP49918 316 aaPredicted RBP15.17■□□□□ 0.02
GPN1-212ENST00000616939 NKX2-5P52952 324 aaPredicted RBP15.17■□□□□ 0.02
GPN1-212ENST00000616939 OLR1P78380 273 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 MRPS6P82932 125 aaKnown RBP15.17■□□□□ 0.02
GPN1-212ENST00000616939 CREMQ03060 361 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 C18orf21Q32NC0 220 aaPredicted RBP15.17■□□□□ 0.02
GPN1-212ENST00000616939 TTC23LQ6PF05 361 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 CBLL1Q75N03 491 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 P3H2Q8IVL5 708 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 SLC22A15Q8IZD6 547 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 C10orf111Q8N326 155 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 DNAJC22Q8N4W6 341 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 C9orf43Q8TAL5 461 aaPredicted RBP15.17■□□□□ 0.02
GPN1-212ENST00000616939 CHTF18Q8WVB6 975 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 MAGEH1Q9H213 219 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 REEP1Q9H902 201 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 N6AMT1Q9Y5N5 214 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 TRPV2Q9Y5S1 764 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 TTC3P53804 2025 aa15.17■□□□□ 0.02
GPN1-212ENST00000616939 GPR182O15218 404 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 INSIG1O15503 277 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 ULK1O75385 1050 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 PRLP01236 227 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 ALOX12P18054 663 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 GGT2P36268 569 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 PIK3CGP48736 1102 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 RING1Q06587 406 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.16■□□□□ 0.02
GPN1-212ENST00000616939 CAMK2GQ13555 558 aaPredicted RBP15.16■□□□□ 0.02
GPN1-212ENST00000616939 IRF3Q14653 427 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 SYT16Q17RD7 645 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 INO80DQ53TQ3 878 aaPredicted RBP15.16■□□□□ 0.02
GPN1-212ENST00000616939 PRSS36Q5K4E3 855 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 ATAD3CQ5T2N8 411 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 FAM171A1Q5VUB5 890 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 DLK2Q6UY11 383 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 TAS2R42Q7RTR8 314 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 ZZZ3Q8IYH5 903 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 RGL4Q8IZJ4 473 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 ASCC1Q8N9N2 400 aaKnown RBP15.16■□□□□ 0.02
GPN1-212ENST00000616939 LPPQ93052 612 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 RMDN1Q96DB5 314 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 TMCO6Q96DC7 493 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 RPRD1AQ96P16 312 aaPredicted RBP15.16■□□□□ 0.02
GPN1-212ENST00000616939 COL21A1Q96P44 957 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 KATNAL1Q9BW62 490 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 SPATA9Q9BWV2 254 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 FAM126AQ9BYI3 521 aaPredicted RBP15.16■□□□□ 0.02
GPN1-212ENST00000616939 CD244Q9BZW8 370 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 ELOVL2Q9NXB9 296 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 ZNF490Q9ULM2 529 aaPredicted RBP15.16■□□□□ 0.02
GPN1-212ENST00000616939 PCDHB8Q9UN66 801 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 SLC45A1Q9Y2W3 748 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 SAMHD1Q9Y3Z3 626 aaKnown RBP15.16■□□□□ 0.02
GPN1-212ENST00000616939 PCDHGA6Q9Y5G7 932 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 BPTFQ12830 3046 aa15.16■□□□□ 0.02
GPN1-212ENST00000616939 MYO1GB0I1T2 1018 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 ZNF682O95780 498 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 MYCLP1P12525 358 aaPredicted RBP15.15■□□□□ 0.02
GPN1-212ENST00000616939 MAPK1P28482 360 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 OR1E1P30953 314 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 HTR3AP46098 478 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 KRT6CP48668 564 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 HSPA7P48741 367 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 RGS4P49798 205 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 OR2B6P58173 313 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 ARPC4P59998 168 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 IL1RL1Q01638 556 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 EIF4HQ15056 248 aaKnown RBP15.15■□□□□ 0.02
GPN1-212ENST00000616939 VMACQ2NL98 169 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 ZRANB3Q5FWF4 1079 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 GPR155Q7Z3F1 870 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 ZSWIM9Q86XI8 627 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 SYTL1Q8IYJ3 562 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 BEND7Q8N7W2 519 aaPredicted RBP15.15■□□□□ 0.02
GPN1-212ENST00000616939 ATG16L2Q8NAA4 619 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 FLCNQ8NFG4 579 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 PPP1R13LQ8WUF5 828 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 NELL1Q92832 810 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 FUBP3Q96I24 572 aaKnown RBP eCLIP15.15■□□□□ 0.02
GPN1-212ENST00000616939 NUAK2Q9H093 628 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 EHD3Q9NZN3 535 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 ST3GAL5Q9UNP4 418 aa15.15■□□□□ 0.02
GPN1-212ENST00000616939 WBP11Q9Y2W2 641 aaKnown RBP15.15■□□□□ 0.02
GPN1-212ENST00000616939 ANGPTL3Q9Y5C1 460 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms