RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 NCBP2P52298 156 aaKnown RBP eCLIP3.7□□□□□ -1.82
LTN1-207ENST00000614971 CHN2P52757 468 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 INAQ16352 499 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 ZNF57Q68EA5 555 aaPredicted RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 ZNF730Q6ZMV8 503 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 TRIM73Q86UV7 250 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 MAL2Q969L2 176 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 DPYSL5Q9BPU6 564 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 SORBS1Q9BX66 1292 aaKnown RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 RDH14Q9HBH5 336 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 BATF3Q9NR55 127 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 STARD5Q9NSY2 213 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 ZDHHC3Q9NYG2 299 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 COL16A1Q07092 1604 aaPredicted RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 CACNA1DQ01668 2161 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 TCRBV21S2A2A0A5A6 115 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 MAGEB17A8MXT2 336 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 PRR23D1E9PI22 279 aaPredicted RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 TYROBPO43914 113 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 B4GALT3O60512 393 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 PRR23D2P0DMB1 279 aaPredicted RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 FCGR1AP12314 374 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 BPIP17213 487 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 IMPDH1P20839 514 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 CXCR2P25025 360 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 CTGFP29279 349 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 C1DQ13901 141 aaKnown RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 ZNHIT3Q15649 155 aaPredicted RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 SMAD2Q15796 467 aaKnown RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 DEFB134Q4QY38 66 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 PTCHD4Q6ZW05 846 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 SATL1Q86VE3 508 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 CCDC116Q8IYX3 515 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 FAM9CQ8IZT9 166 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 ZNF433Q8N7K0 673 aaPredicted RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 DTX3Q8N9I9 347 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 DCAF4L2Q8NA75 395 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 OR7A2PQ8NGA2 310 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 OR2T34Q8NGX1 318 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 OR2T3Q8NH03 318 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 SETD7Q8WTS6 366 aaKnown RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 PIH1D2Q8WWB5 315 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 IMP4Q96G21 291 aaKnown RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 RIPOR3Q96MK2 946 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 ZNF570Q96NI8 536 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 KCNC2Q96PR1 638 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 SLC2A13Q96QE2 648 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 HERC2P3Q9BVR0 1158 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 BTBD1Q9H0C5 482 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 HEBP1Q9NRV9 189 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 ERVW-1Q9UQF0 538 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 PCDHGA4Q9Y5G9 962 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 VPS4BO75351 444 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 PGLSO95336 258 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 BCHEP06276 602 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 PRG2P13727 222 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 AK4P27144 223 aaPredicted RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 SERPINB1P30740 379 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 DLG1Q12959 904 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 SLC5A9Q2M3M2 681 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 GTDC1Q4AE62 458 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 INO80DQ53TQ3 878 aaPredicted RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 PPP1R15BQ5SWA1 713 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 FRG2Q64ET8 278 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 CXorf57Q6NSI4 855 aaKnown RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 ZFP1Q6P2D0 407 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 PRMT9Q6P2P2 845 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 ZC3H14Q6PJT7 736 aaKnown RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 CHRDL2Q6WN34 429 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 THOC6Q86W42 341 aaKnown RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 NXPE1Q8N323 547 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 LILRA3Q8N6C8 439 aaPredicted RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 ZNF671Q8TAW3 534 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 WFDC5Q8TCV5 224 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 PIGKQ92643 395 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 FGF13Q92913 245 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 DEPDC7Q96QD5 511 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 FRG2BQ96QU4 278 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 APOL4Q9BPW4 351 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 DUSP26Q9BV47 211 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 TTLL2Q9BWV7 592 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 SMURF2Q9HAU4 748 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 PNPLA8Q9NP80 782 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 GMPR2Q9P2T1 348 aaKnown RBP3.7□□□□□ -1.82
LTN1-207ENST00000614971 VPS29Q9UBQ0 182 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 A0A1B0GUL6 1792 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 DOCK5Q9H7D0 1870 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 SLC16A5O15375 505 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 GRID2O43424 1007 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 DFNA5O60443 496 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 SLC35G6P0C7Q6 338 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 LAMP2P13473 410 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 ENGP17813 658 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 BMP7P18075 431 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 CPN2P22792 545 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 KCNC4Q03721 635 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 PRAMEF13Q5VWM6 474 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 SULT1C3Q6IMI6 304 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 TDRPQ86YL5 185 aa3.7□□□□□ -1.82
LTN1-207ENST00000614971 ZDHHC21Q8IVQ6 265 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms