RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 EIF3IQ13347 325 aaKnown RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 CATSPEREQ5SY80 951 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 PRAMEF9Q5VWM5 478 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 C8orf74Q6P047 294 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 IGF2-ASQ6U949 168 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 LAPTM4BQ86VI4 370 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 PTRH1Q86Y79 214 aaKnown RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 CNTN4Q8IWV2 1026 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 NLGN4XQ8N0W4 816 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 LSMEM2Q8N112 164 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 NLGN4YQ8NFZ3 816 aaPredicted RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 PYROXD1Q8WU10 500 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 TSNARE1Q96NA8 513 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 C19orf43Q9BQ61 176 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 DPH7Q9BTV6 452 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 TWSG1Q9GZX9 223 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 ACTL8Q9H568 366 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 MVB12BQ9H7P6 319 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 VPS37BQ9H9H4 285 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 LHX9Q9NQ69 397 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 PCMTD2Q9NV79 361 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 ZFATQ9P243 1243 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 SLC39A10Q9ULF5 831 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 PCDHGA3Q9Y5H0 932 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 FAM95CA0A1B0GW59 222 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 B4E171 279 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 RASGRF2O14827 1237 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 HAT1O14929 419 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 ALAS2P22557 587 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 TSPAN7P41732 249 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 STAT5AP42229 794 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 VSX2P58304 361 aaPredicted RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 VAC14Q08AM6 782 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 PRKAA1Q13131 559 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 TRA2AQ13595 282 aaKnown RBP eCLIP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 AARS2Q5JTZ9 985 aaKnown RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 MANEAQ5SRI9 462 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 ARMC6Q6NXE6 501 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 UBE2R2Q712K3 238 aaPredicted RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 DCUN1D3Q8IWE4 304 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 CTAGE3PQ8IX95 158 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 PPM1NQ8N819 430 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 OR2L3Q8NG85 312 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 HEXDCQ8WVB3 486 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 STARD8Q92502 1023 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 KCNJ9Q92806 393 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 PTERQ96BW5 349 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 MED8Q96G25 268 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 VPS39Q96JC1 886 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 TRIM4Q9C037 500 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 C1GALT1Q9NS00 363 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 LUZP4Q9P127 313 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 NFU1Q9UMS0 254 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 C2orf74A8MZ97 194 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 C4orf51C9J302 202 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 GFYI3L273 518 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 ZBTB14O43829 449 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 SH3BGRLO75368 114 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 FGF5P12034 268 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 PAMP19021 973 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 FDXRP22570 491 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 MAGEA4P43358 317 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 ARL4DP49703 201 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 ADARP55265 1226 aaKnown RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 MAT1AQ00266 395 aaKnown RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 LAMB3Q13751 1172 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 TSNQ15631 228 aaKnown RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 DEFB109BQ30KR1 87 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 SPANXN3Q5MJ09 141 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 LYPLAL1Q5VWZ2 237 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 SBSNQ6UWP8 590 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 TTLL10Q6ZVT0 673 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 GPR155Q7Z3F1 870 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 ZNF572Q7Z3I7 529 aaPredicted RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 DNAJC22Q8N4W6 341 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 GSDMBQ8TAX9 411 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 SREK1Q8WXA9 508 aaKnown RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 EXT2Q93063 718 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 CLIP3Q96DZ5 547 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 PANX3Q96QZ0 392 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 DDA1Q9BW61 102 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 RAB33BQ9H082 229 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 GPN2Q9H9Y4 310 aaPredicted RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 INTS10Q9NVR2 710 aaKnown RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 CTSFQ9UBX1 484 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 RARRES3Q9UL19 164 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 VWA7Q9Y334 891 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 MAGEB16A2A368 324 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 MEN1O00255 615 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 KCNJ13O60928 360 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 RORAP35398 523 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 GLRBP48167 497 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 TBPL1P62380 186 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 TUBB4BP68371 445 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 TUBB2AQ13885 445 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 OR4D1Q15615 310 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 MROH9Q5TGP6 573 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 TMEM164Q5U3C3 297 aa5.47□□□□□ -1.53
CPNE3-208ENST00000614678 ZNF385CQ66K41 422 aaPredicted RBP5.47□□□□□ -1.53
CPNE3-208ENST00000614678 FIGLAQ6QHK4 219 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms