RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 FARSBQ9NSD9 589 aaKnown RBP19.72■□□□□ 0.75
CTDP1-208ENST00000613122 NCDNQ9UBB6 729 aa19.72■□□□□ 0.75
CTDP1-208ENST00000613122 MAN2B2Q9Y2E5 1009 aa19.72■□□□□ 0.75
CTDP1-208ENST00000613122 FAM149AA5PLN7 773 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 GRID2O43424 1007 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 ACVR2AP27037 513 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 KCNJ5P48544 419 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 MTPNP58546 118 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 RNASE12Q5GAN4 147 aaKnown RBP19.71■□□□□ 0.75
CTDP1-208ENST00000613122 OR2L5Q8NG80 312 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 CENPNQ96H22 339 aaPredicted RBP19.71■□□□□ 0.75
CTDP1-208ENST00000613122 FAM83CQ9BQN1 747 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 ARHGAP39Q9C0H5 1083 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 SPATA6Q9NWH7 488 aaPredicted RBP19.71■□□□□ 0.75
CTDP1-208ENST00000613122 SCDO00767 359 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 PRAMEF11O60813 436 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 NADKO95544 446 aaPredicted RBP19.71■□□□□ 0.75
CTDP1-208ENST00000613122 OAS1P00973 400 aaKnown RBP19.71■□□□□ 0.75
CTDP1-208ENST00000613122 DUSP3P51452 185 aaPredicted RBP19.71■□□□□ 0.75
CTDP1-208ENST00000613122 CMTR2Q8IYT2 770 aaKnown RBP19.71■□□□□ 0.75
CTDP1-208ENST00000613122 ZNF208O43345 1280 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 ANGPTL1O95841 491 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 IL12AP29459 219 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 SDC2P34741 201 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 TARDBPQ13148 414 aaKnown RBP eCLIP19.71■□□□□ 0.754e-6■■■■□ 19.5
CTDP1-208ENST00000613122 PAFAH1B3Q15102 231 aaKnown RBP19.71■□□□□ 0.75
CTDP1-208ENST00000613122 ELOCQ15369 112 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 UPP1Q16831 310 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 TMEM126BQ8IUX1 230 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 NAT8LQ8N9F0 302 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 OR10H4Q8NGA5 316 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 SLC35A5Q9BS91 424 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 PIRO00625 290 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 RASGEF1BQ0VAM2 473 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 PDSS1Q5T2R2 415 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 ATG14Q6ZNE5 492 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 SERINC5Q86VE9 423 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 IQCHQ86VS3 1027 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 TPK1Q9H3S4 243 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 MOCS1Q9NZB8 636 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 UTS2RQ9UKP6 389 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 ADAMTS3O15072 1205 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 SERPINA3P01011 423 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 HYAL2Q12891 473 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 IL18Q14116 193 aa19.71■□□□□ 0.75
CTDP1-208ENST00000613122 COCHO43405 550 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 INCA1Q0VD86 236 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 C1orf52Q8N6N3 182 aaKnown RBP19.7■□□□□ 0.74
CTDP1-208ENST00000613122 BHLHE41Q9C0J9 482 aaPredicted RBP19.7■□□□□ 0.74
CTDP1-208ENST00000613122 MARK1Q9P0L2 795 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 PCDHB3Q9Y5E6 796 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 IQCF3P0C7M6 154 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 DSTNP60981 165 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 CCINQ13939 588 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 ELAC1Q9H777 363 aaKnown RBP19.7■□□□□ 0.74
CTDP1-208ENST00000613122 SPHK2Q9NRA0 654 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 VSTM5A8MXK1 200 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 STATHP02808 62 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 HMGCS1Q01581 520 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 SNTA1Q13424 505 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 PUM1Q14671 1186 aaKnown RBP eCLIP19.7■□□□□ 0.74
CTDP1-208ENST00000613122 GRHL3Q8TE85 626 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 GMLQ99445 158 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 CTPS2Q9NRF8 586 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 LOC110117498-PIK3R3F6TDL0 507 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 AHSA2Q719I0 299 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 NXPE1Q8N323 547 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 LDAHQ9H6V9 325 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 GRHL1Q9NZI5 618 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.7■□□□□ 0.74
CTDP1-208ENST00000613122 SHPRHQ149N8 1683 aa19.7■□□□□ 0.74
CTDP1-208ENST00000613122 M0R2N6 131 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 GALNT2Q10471 571 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 PRRT3Q5FWE3 981 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 MCFD2Q8NI22 146 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 SETD6Q8TBK2 473 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 Q9N2J8 555 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 SLC17A6Q9P2U8 582 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 AKAP8O43823 692 aaKnown RBP19.69■□□□□ 0.74
CTDP1-208ENST00000613122 PCDHGA12O60330 932 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 B4GALT2O60909 372 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 CNTN5O94779 1100 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 CD2P06729 351 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 DBIP07108 87 aaKnown RBP19.69■□□□□ 0.74
CTDP1-208ENST00000613122 TYRP1P17643 537 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 GRIA1P42261 906 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 ARCN1P48444 511 aaKnown RBP19.69■□□□□ 0.74
CTDP1-208ENST00000613122 DCUN1D3Q8IWE4 304 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 TMEM209Q96SK2 561 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 ING4Q9UNL4 249 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 A8MUI8 341 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 GSTT1P30711 240 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 SLC29A3Q9BZD2 475 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 B4GALT6Q9UBX8 382 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 PCDHGB5Q9Y5G0 923 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 NOX1Q9Y5S8 564 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 WASHC1A8K0Z3 465 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 WASH3PC4AMC7 463 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 VLDLRP98155 873 aa19.69■□□□□ 0.74
CTDP1-208ENST00000613122 MC1RQ01726 317 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms