RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 FBXO27Q8NI29 283 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 ZNF480Q8WV37 535 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 UTP4Q969X6 686 aaKnown RBP8.65□□□□□ -1.03
CCDC47-207ENST00000612558 MCUR1Q96AQ8 359 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 RAD51AP1Q96B01 352 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 MED8Q96G25 268 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 MYOCQ99972 504 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 LTB4R2Q9NPC1 389 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 GPRC5BQ9NZH0 403 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 KLQ9UEF7 1012 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 GIMAP2Q9UG22 337 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 MOSPD1Q9UJG1 213 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 PRDM4Q9UKN5 801 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 ZNF490Q9ULM2 529 aaPredicted RBP8.65□□□□□ -1.03
CCDC47-207ENST00000612558 SUFUQ9UMX1 484 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 SNX6Q9UNH7 406 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 KCNE2Q9Y6J6 123 aa8.65□□□□□ -1.03
CCDC47-207ENST00000612558 PCM1Q15154 2024 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 PRSS38A1L453 326 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 FFAR3O14843 346 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 CLGNO14967 610 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 GPR42O15529 346 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 ZNF217O75362 1048 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 SLC35G4P0C7Q5 338 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 JUPP14923 745 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 GNAZP19086 355 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 IDSP22304 550 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 GPX3P22352 226 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 CPOXP36551 454 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 PGM1P36871 562 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 HSD17B2P37059 387 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 MRPL19P49406 292 aaKnown RBP8.64□□□□□ -1.03
CCDC47-207ENST00000612558 CLCNKAP51800 687 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 YPEL5P62699 121 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 IRF8Q02556 426 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 EMX2Q04743 252 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 ZNF33BQ06732 778 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 STX5Q13190 355 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 CHIT1Q13231 466 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 CUL3Q13618 768 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 GAS6Q14393 721 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 NFATC4Q14934 902 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 RPS6KA2Q15349 733 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 CPSF6Q16630 551 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCDC47-207ENST00000612558 KIF19Q2TAC6 998 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 SMU1Q2TAY7 513 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 AGKQ53H12 422 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 TMEM31Q5JXX7 168 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 C6orf136Q5SQH8 315 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 KIAA0895LQ68EN5 471 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 ENPP7Q6UWV6 458 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 SFRP1Q8N474 314 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 PHC3Q8NDX5 983 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 OR5K2Q8NHB8 316 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 SETD7Q8WTS6 366 aaKnown RBP8.64□□□□□ -1.03
CCDC47-207ENST00000612558 USP7Q93009 1102 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 TOE1Q96GM8 510 aaKnown RBP8.64□□□□□ -1.03
CCDC47-207ENST00000612558 BMFQ96LC9 184 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 PPP3R2Q96LZ3 170 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 OR4K3Q96R72 315 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 EFCAB1Q9HAE3 211 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 SDR39U1Q9NRG7 319 aaPredicted RBP8.64□□□□□ -1.03
CCDC47-207ENST00000612558 WSB2Q9NYS7 404 aaPredicted RBP8.64□□□□□ -1.03
CCDC47-207ENST00000612558 CCDC167Q9P0B6 97 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 CIDEBQ9UHD4 219 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 PSMD13Q9UNM6 376 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 CYP8B1Q9UNU6 501 aa8.64□□□□□ -1.03
CCDC47-207ENST00000612558 KCNE1BA0A087WTH5 132 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 SERTM1A2A2V5 107 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 PRR19A6NJB7 356 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 MEI4A8MW99 385 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 E7ENX8 843 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 PRAMEF26H0Y7S4 382 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 H0Y8X5 98 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 TNFRSF10CO14798 259 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 AIM2O14862 343 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 LSM1O15116 133 aaKnown RBP8.63□□□□□ -1.03
CCDC47-207ENST00000612558 PI15O43692 258 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 PRAMEF4O60810 478 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 IGHV4-34P06331 123 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 SNRPB2P08579 225 aaKnown RBP8.63□□□□□ -1.03
CCDC47-207ENST00000612558 CD1EP15812 388 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 CCND1P24385 295 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 RPL10P27635 214 aaKnown RBP8.63□□□□□ -1.03
CCDC47-207ENST00000612558 CD6P30203 668 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 NUDT1P36639 197 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 HNF4AP41235 474 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 HALP42357 657 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 CASP2P42575 452 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 GNPDA1P46926 289 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 PNLIPRP1P54315 467 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 TBPL1P62380 186 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 SLC25A3Q00325 362 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 TAP2Q03519 686 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 MAD2L1Q13257 205 aaPredicted RBP8.63□□□□□ -1.03
CCDC47-207ENST00000612558 ARHGAP19Q14CB8 494 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 NR6A1Q15406 480 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 IMPG1Q17R60 797 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 AP5B1Q2VPB7 878 aa8.63□□□□□ -1.03
CCDC47-207ENST00000612558 XKR6Q5GH73 641 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms