RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 NAPRTQ6XQN6 538 aa21■□□□□ 0.95
CBWD3-207ENST00000611426 ENDOVQ8N8Q3 282 aaKnown RBP21■□□□□ 0.95
CBWD3-207ENST00000611426 HDAC10Q969S8 669 aa21■□□□□ 0.95
CBWD3-207ENST00000611426 ZBTB9Q96C00 473 aa21■□□□□ 0.95
CBWD3-207ENST00000611426 PAFAH2Q99487 392 aa21■□□□□ 0.95
CBWD3-207ENST00000611426 NLNQ9BYT8 704 aa21■□□□□ 0.95
CBWD3-207ENST00000611426 CENPHQ9H3R5 247 aa21■□□□□ 0.95
CBWD3-207ENST00000611426 ACSS2Q9NR19 701 aa21■□□□□ 0.95
CBWD3-207ENST00000611426 PCMTD2Q9NV79 361 aa21■□□□□ 0.95
CBWD3-207ENST00000611426 SENP1Q9P0U3 644 aa21■□□□□ 0.95
CBWD3-207ENST00000611426 SAMD15Q9P1V8 674 aa21■□□□□ 0.95
CBWD3-207ENST00000611426 POLG2Q9UHN1 485 aa21■□□□□ 0.95
CBWD3-207ENST00000611426 E7EQ34 232 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 ACADLP28330 430 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 SHMT2P34897 504 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 ITGA1P56199 1179 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 MAGOHP61326 146 aaKnown RBP20.99■□□□□ 0.95
CBWD3-207ENST00000611426 CBX1P83916 185 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 TUBB8Q3ZCM7 444 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 KBTBD12Q3ZCT8 623 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 SYTL3Q4VX76 610 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 SPESP1Q6UW49 350 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 CDHR3Q6ZTQ4 885 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 TBC1D21Q8IYX1 336 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 OR13J1Q8NGT2 312 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 DCAKDQ8WVC6 231 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 RANBP9Q96S59 729 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 ING2Q9H160 280 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 SLC2A6Q9UGQ3 507 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 ADAM21Q9UKJ8 722 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 TDRKHQ9Y2W6 561 aaKnown RBP20.99■□□□□ 0.95
CBWD3-207ENST00000611426 FAM169AQ9Y6X4 670 aa20.99■□□□□ 0.95
CBWD3-207ENST00000611426 SLC5A10A0PJK1 596 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 F8W8V4 182 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 OR1I1O60431 355 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 GOT2P00505 430 aaKnown RBP20.98■□□□□ 0.95
CBWD3-207ENST00000611426 ADRA1DP25100 572 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 CCL11P51671 97 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 PLOD1Q02809 727 aaPredicted RBP20.98■□□□□ 0.95
CBWD3-207ENST00000611426 CHAF1BQ13112 559 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 PCID2Q5JVF3 399 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 TSTD2Q5T7W7 516 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 CPZQ66K79 652 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 CAPN12Q6ZSI9 719 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 TAOK1Q7L7X3 1001 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 LRRC6Q86X45 466 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 SYTL1Q8IYJ3 562 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 OR6P1Q8NGX9 317 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 N4BP2L2Q92802 583 aaPredicted RBP20.98■□□□□ 0.95
CBWD3-207ENST00000611426 CNOT10Q9H9A5 744 aaKnown RBP20.98■□□□□ 0.95
CBWD3-207ENST00000611426 TCFL5Q9UL49 500 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 SEC16AO15027 2179 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 PTPN13Q12923 2485 aa20.98■□□□□ 0.95
CBWD3-207ENST00000611426 ZCWPW2A0A1B0GU75 182 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 SMIM23A6NLE4 172 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 ZNF749O43361 778 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 PDGFAP04085 211 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 HBQ1P09105 142 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 UGT2B7P16662 529 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 PPP2R2AP63151 447 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 GABPB1Q06547 395 aaPredicted RBP20.97■□□□□ 0.95
CBWD3-207ENST00000611426 PTCHD3Q3KNS1 767 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 ANKRD20A4Q4UJ75 823 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 CASC4Q6P4E1 433 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 AFTPHQ6ULP2 937 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 SLC26A11Q86WA9 606 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 GPR135Q8IZ08 494 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 OR4L1Q8NH43 312 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 OR5K2Q8NHB8 316 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 TCTN2Q96GX1 697 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 SLC25A23Q9BV35 468 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 PSD3Q9NYI0 1048 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 CTNNAL1Q9UBT7 734 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 RIMKLBQ9ULI2 386 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 CHRM5P08912 532 aaPredicted RBP20.97■□□□□ 0.95
CBWD3-207ENST00000611426 AGXTP21549 392 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 MSH2P43246 934 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 PGDP52209 483 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 CSE1LP55060 971 aaKnown RBP20.97■□□□□ 0.95
CBWD3-207ENST00000611426 MLLT10P55197 1068 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 CRADDP78560 199 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 EFTUD2Q15029 972 aaKnown RBP eCLIP20.97■□□□□ 0.95
CBWD3-207ENST00000611426 FASTKD1Q53R41 847 aaKnown RBP20.97■□□□□ 0.95
CBWD3-207ENST00000611426 FAM69BQ5VUD6 431 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 TRMT10BQ6PF06 316 aaKnown RBP20.97■□□□□ 0.95
CBWD3-207ENST00000611426 NLRP9Q7RTR0 991 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 TRIM73Q86UV7 250 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 TRABD2AQ86V40 505 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 EXOC3L1Q86VI1 746 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 CYP4X1Q8N118 509 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 C19orf47Q8N9M1 422 aaKnown RBP20.97■□□□□ 0.95
CBWD3-207ENST00000611426 ADAMTS17Q8TE56 1095 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 MZB1Q8WU39 189 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 PEX13Q92968 403 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 ZNF778Q96MU6 729 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 OR2A14Q96R47 310 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 DPH2Q9BQC3 489 aaPredicted RBP20.97■□□□□ 0.95
CBWD3-207ENST00000611426 FAM60AQ9NP50 221 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 SPHK1Q9NYA1 384 aa20.97■□□□□ 0.95
CBWD3-207ENST00000611426 OR6C2Q9NZP2 312 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms