RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ACPPP15309 386 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 RGS4P49798 205 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 TMEM132CQ8N3T6 1108 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 WFDC5Q8TCV5 224 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 Q96MT0 163 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 WDR12Q9GZL7 423 aaKnown RBP19.87■□□□□ 0.77
SSBP3-216ENST00000610401 RNF38Q9H0F5 515 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 SLC22A14Q9Y267 594 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 TNPO3Q9Y5L0 923 aaKnown RBP19.87■□□□□ 0.77
SSBP3-216ENST00000610401 MYO16Q9Y6X6 1858 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 PCDHGA12O60330 932 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 TBL1XO60907 577 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 WDR47O94967 919 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 ZNF7P17097 686 aaPredicted RBP19.87■□□□□ 0.77
SSBP3-216ENST00000610401 MAPKAPK2P49137 400 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 RPIAP49247 311 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 RPP38P78345 283 aaKnown RBP19.87■□□□□ 0.77
SSBP3-216ENST00000610401 OR2T5Q6IEZ7 315 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 CCDC71Q8IV32 467 aaPredicted RBP19.87■□□□□ 0.77
SSBP3-216ENST00000610401 OR2T29Q8NH02 315 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 SLC35B4Q969S0 331 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 ZNF641Q96N77 438 aaPredicted RBP19.87■□□□□ 0.77
SSBP3-216ENST00000610401 CD244Q9BZW8 370 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 RAPGEFL1Q9UHV5 662 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 TPRKBQ9Y3C4 175 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 CCL27Q9Y4X3 112 aa19.87■□□□□ 0.77
SSBP3-216ENST00000610401 STK16O75716 305 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 SCELO95171 688 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 ITIH1P19827 911 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 POU1F1P28069 291 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 PLEKHG7Q6ZR37 379 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 TPGS1Q6ZTW0 290 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 SVOPLQ8N434 492 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 DNASE1L2Q92874 299 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 HSH2DQ96JZ2 352 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 CORO1BQ9BR76 489 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 MAGEH1Q9H213 219 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 SLC6A14Q9UN76 642 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 FAM32AQ9Y421 112 aaKnown RBP19.86■□□□□ 0.77
SSBP3-216ENST00000610401 COCHO43405 550 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 ZNF623O75123 536 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 ELNP15502 786 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 TYMPP19971 482 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 GADD45AP24522 165 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 HUNKP57058 714 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 USP39Q53GS9 565 aaKnown RBP19.86■□□□□ 0.77
SSBP3-216ENST00000610401 MFSD4AQ8N468 514 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 KCNS3Q9BQ31 491 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 TMEM121BQ9BXQ6 578 aaPredicted RBP19.86■□□□□ 0.77
SSBP3-216ENST00000610401 DSN1Q9H410 356 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 ACOT13Q9NPJ3 140 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 IL17CQ9P0M4 197 aa19.86■□□□□ 0.77
SSBP3-216ENST00000610401 EVPLLA8MZ36 301 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 IL6P05231 212 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 PABPC1P11940 636 aaKnown RBP19.85■□□□□ 0.77
SSBP3-216ENST00000610401 ATF6P18850 670 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 CA8P35219 290 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 SERPINB10P48595 397 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 GPR149Q86SP6 731 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 FAM217AQ8IXS0 508 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 HS6ST3Q8IZP7 471 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 TTC30BQ8N4P2 665 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 C8orf48Q96LL4 319 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 ZFYVE1Q9HBF4 777 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 IL26Q9NPH9 171 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 IL37Q9NZH6 218 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 SCHIP1Q9P0W5 487 aaPredicted RBP19.85■□□□□ 0.77
SSBP3-216ENST00000610401 GABRQQ9UN88 632 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 SMIM30A4D0T7 59 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 AIREO43918 545 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 CTGFP29279 349 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 POM121L1PQ3SYA9 428 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 HIPK1Q86Z02 1210 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 BEND7Q8N7W2 519 aaPredicted RBP19.85■□□□□ 0.77
SSBP3-216ENST00000610401 OR51E2Q9H255 320 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 CLMPQ9H6B4 373 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 GPR83Q9NYM4 423 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 DNMT3LQ9UJW3 386 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 ERVK-11Q9UQG0 969 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 TRIM64BA6NI03 449 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 CLIC1O00299 241 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 FPGTO14772 594 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 KDELR3O43731 214 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 DAB2P98082 770 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 SELENBP1Q13228 472 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 PLD1Q13393 1074 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 UBE2J2Q8N2K1 259 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 OR6Q1Q8NGQ2 317 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 RAD18Q9NS91 495 aa19.85■□□□□ 0.77
SSBP3-216ENST00000610401 GABARAPO95166 117 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 OAZ2O95190 189 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 CD40LGP29965 261 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 SLC35A2P78381 396 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 CACNG1Q06432 222 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 DMPKQ09013 629 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 MGAT3Q09327 533 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 CBX2Q14781 532 aaPredicted RBP19.84■□□□□ 0.77
SSBP3-216ENST00000610401 HIST2H2ACQ16777 129 aaPredicted RBP19.84■□□□□ 0.77
SSBP3-216ENST00000610401 GATAD2AQ86YP4 633 aa19.84■□□□□ 0.77
SSBP3-216ENST00000610401 COPS4Q9BT78 406 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms