RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 FAM20CQ8IXL6 584 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 TMEM102Q8N9M5 508 aaPredicted RBP13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 TEX19Q8NA77 164 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 OR2L3Q8NG85 312 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 SNF8Q96H20 258 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 VPS50Q96JG6 964 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 RUFY1Q96T51 708 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 ING2Q9H160 280 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 ANKMY1Q9P2S6 941 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 ZC3H7BQ9UGR2 993 aaKnown RBP13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 KLHL20Q9Y2M5 609 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 DHRS7Q9Y394 339 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 BAHCC1Q9P281 2608 aa13.84□□□□□ -0.19
PKNOX1-210ENST00000607049 A0A1B0GX78 115 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 ARGFXA6NJG6 315 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 ARHGEF33A8MVX0 844 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 KLHL41O60662 606 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 HAUS5O94927 633 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 ITGAXP20702 1163 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 GRIA3P42263 894 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 PTGIRP43119 386 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 GABRA4P48169 554 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 PGDP52209 483 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 PNLIPRP1P54315 467 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 KLRB1Q12918 225 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 IL10RAQ13651 578 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 SSPNQ14714 243 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 CCSMST1Q4G0I0 132 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 NKAIN1Q4KMZ8 207 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 THEMIS2Q5TEJ8 643 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 FAM198BQ6UWH4 519 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 TTLL10Q6ZVT0 673 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 ASB18Q6ZVZ8 466 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 FBXO15Q8NCQ5 510 aaPredicted RBP13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 C2CD4AQ8NCU7 369 aaPredicted RBP13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 MCOLN3Q8TDD5 553 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 CERS2Q96G23 380 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 FER1L6-AS2Q96M78 137 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 GBP5Q96PP8 586 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 GPR21Q99679 349 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 AARSD1Q9BTE6 412 aaKnown RBP13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 ACAT2Q9BWD1 397 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 MRPS30Q9NP92 439 aaKnown RBP13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 DHCR7Q9UBM7 475 aaKnown RBP13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 TLK1Q9UKI8 766 aa13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 PTRH2Q9Y3E5 179 aaKnown RBP13.83□□□□□ -0.2
PKNOX1-210ENST00000607049 EFCAB8A8MWE9 144 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 PRICKLE3O43900 615 aaPredicted RBP13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 HIST1H2AGP0C0S8 130 aaPredicted RBP13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 HIST1H2ADP20671 130 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 OTX2P32243 289 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 CARSP49589 748 aaKnown RBP13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 CCL11P51671 97 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 ABATP80404 500 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 MPP1Q00013 466 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 KCNC4Q03721 635 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 CALCOCO2Q13137 446 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 CUL1Q13616 776 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 FCRL6Q6DN72 434 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 LCN10Q6JVE6 187 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 UBE2R2Q712K3 238 aaPredicted RBP13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 MAATS1Q7Z4T9 603 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 MYO1HQ8N1T3 1032 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 OR2A1Q8NGT9 310 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 ASB11Q8WXH4 323 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 RERGQ96A58 199 aaPredicted RBP13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 PTERQ96BW5 349 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 CFAP36Q96G28 342 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 HIST1H2AHQ96KK5 128 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 HIST1H2AJQ99878 128 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 ZFYVE21Q9BQ24 234 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 H2AFJQ9BTM1 129 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 DPH7Q9BTV6 452 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 SLC25A23Q9BV35 468 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 CUTCQ9NTM9 273 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 GALPQ9UBC7 116 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 CORO1CQ9ULV4 474 aaPredicted RBP13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 PYCARDQ9ULZ3 195 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 TP53TG5Q9Y2B4 290 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 KLK4Q9Y5K2 254 aa13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 TLN1Q9Y490 2541 aaKnown RBP13.82□□□□□ -0.2
PKNOX1-210ENST00000607049 CFAP46Q8IYW2 2715 aa13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 H3BMH7 237 aa13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 TXNDC9O14530 226 aa13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 DSCR3O14972 297 aa13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 TTI1O43156 1089 aa13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 PRPF4O43172 522 aaKnown RBP eCLIP13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 HCRTR1O43613 425 aa13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 SLC16A8O95907 504 aa13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 ALBP02768 609 aa13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 EIF2S1P05198 315 aaKnown RBP13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 C8GP07360 202 aa13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 HRH2P25021 359 aa13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 MCM3P25205 808 aa13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 PSMB5P28074 263 aa13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 CASQ1P31415 396 aa13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 CASRP41180 1078 aa13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 ITGA8P53708 1063 aa13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 VSX2P58304 361 aaPredicted RBP13.81□□□□□ -0.2
PKNOX1-210ENST00000607049 NFKB2Q00653 900 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms