RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 MRM3Q9HC36 420 aaKnown RBP23.29■■□□□ 1.32
SNX5-219ENST00000606602 CTSFQ9UBX1 484 aa23.29■■□□□ 1.32
SNX5-219ENST00000606602 PCDHGA10Q9Y5H3 936 aa23.29■■□□□ 1.32
SNX5-219ENST00000606602 HS3ST3B1Q9Y662 390 aa23.29■■□□□ 1.32
SNX5-219ENST00000606602 UNC79Q9P2D8 2635 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 FITM1A5D6W6 292 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 KRT87PA6NCN2 255 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 ANKUB1A6NFN9 424 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 SRPX2O60687 465 aaPredicted RBP23.28■■□□□ 1.32
SNX5-219ENST00000606602 RPS3P23396 243 aaKnown RBP eCLIP23.28■■□□□ 1.32
SNX5-219ENST00000606602 NPY2RP49146 381 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 EIF3BP55884 814 aaKnown RBP23.28■■□□□ 1.32
SNX5-219ENST00000606602 BASP1P80723 227 aaKnown RBP23.28■■□□□ 1.32
SNX5-219ENST00000606602 ELOAQ14241 798 aaKnown RBP23.28■■□□□ 1.32
SNX5-219ENST00000606602 CCNG2Q16589 344 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 CRB2Q5IJ48 1285 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 WASHC2DQ5SRD0 308 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 CNSTQ6PJW8 725 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 KIRREL2Q6UWL6 708 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 LURAP1LQ8IV03 231 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 FOPNLQ96NB1 174 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 WDR77Q9BQA1 342 aaPredicted RBP23.28■■□□□ 1.32
SNX5-219ENST00000606602 ENAMQ9NRM1 1142 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 IL1RAPL1Q9NZN1 696 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 BFARQ9NZS9 450 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 ERRFI1Q9UJM3 462 aaPredicted RBP23.28■■□□□ 1.32
SNX5-219ENST00000606602 MAU2Q9Y6X3 613 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 FAM169AQ9Y6X4 670 aa23.28■■□□□ 1.32
SNX5-219ENST00000606602 CCNFP41002 786 aa23.27■■□□□ 1.32
SNX5-219ENST00000606602 SIX1Q15475 284 aaPredicted RBP23.27■■□□□ 1.32
SNX5-219ENST00000606602 RBBP7Q16576 425 aa23.27■■□□□ 1.32
SNX5-219ENST00000606602 HIF1AQ16665 826 aa23.27■■□□□ 1.32
SNX5-219ENST00000606602 MEI1Q5TIA1 1274 aa23.27■■□□□ 1.32
SNX5-219ENST00000606602 AGAP7PQ5VUJ5 663 aa23.27■■□□□ 1.32
SNX5-219ENST00000606602 FRMPD2BQ6IN97 320 aa23.27■■□□□ 1.32
SNX5-219ENST00000606602 GSTA5Q7RTV2 222 aa23.27■■□□□ 1.32
SNX5-219ENST00000606602 PARP9Q8IXQ6 854 aa23.27■■□□□ 1.32
SNX5-219ENST00000606602 DTWD1Q8N5C7 304 aa23.27■■□□□ 1.32
SNX5-219ENST00000606602 OR2L3Q8NG85 312 aa23.27■■□□□ 1.32
SNX5-219ENST00000606602 HMGCLL1Q8TB92 370 aa23.27■■□□□ 1.32
SNX5-219ENST00000606602 AGAP4Q96P64 663 aa23.27■■□□□ 1.32
SNX5-219ENST00000606602 TSR3Q9UJK0 312 aaKnown RBP23.27■■□□□ 1.32
SNX5-219ENST00000606602 NTNG1Q9Y2I2 539 aa23.27■■□□□ 1.32
SNX5-219ENST00000606602 CSAG2Q9Y5P2 127 aa23.27■■□□□ 1.32
SNX5-219ENST00000606602 HYKKA2RU49 373 aa23.26■■□□□ 1.31
SNX5-219ENST00000606602 AP3B1O00203 1094 aa23.26■■□□□ 1.31
SNX5-219ENST00000606602 CDC25BP30305 580 aa23.26■■□□□ 1.31
SNX5-219ENST00000606602 TUBB8Q3ZCM7 444 aa23.26■■□□□ 1.31
SNX5-219ENST00000606602 CTSL3PQ5NE16 218 aa23.26■■□□□ 1.31
SNX5-219ENST00000606602 CES3Q6UWW8 571 aa23.26■■□□□ 1.31
SNX5-219ENST00000606602 C4orf22Q6V702 233 aa23.26■■□□□ 1.31
SNX5-219ENST00000606602 SDCCAG8Q86SQ7 713 aaPredicted RBP23.26■■□□□ 1.31
SNX5-219ENST00000606602 OR2A1Q8NGT9 310 aa23.26■■□□□ 1.31
SNX5-219ENST00000606602 MAGEC3Q8TD91 643 aa23.26■■□□□ 1.31
SNX5-219ENST00000606602 VPS50Q96JG6 964 aa23.26■■□□□ 1.31
SNX5-219ENST00000606602 AGPAT4Q9NRZ5 378 aa23.26■■□□□ 1.31
SNX5-219ENST00000606602 SEMA3GQ9NS98 782 aa23.26■■□□□ 1.31
SNX5-219ENST00000606602 ZC3H7BQ9UGR2 993 aaKnown RBP23.26■■□□□ 1.31
SNX5-219ENST00000606602 SLC5A6Q9Y289 635 aa23.26■■□□□ 1.31
SNX5-219ENST00000606602 DRG1Q9Y295 367 aaKnown RBP23.26■■□□□ 1.31
SNX5-219ENST00000606602 KLK4Q9Y5K2 254 aa23.26■■□□□ 1.31
SNX5-219ENST00000606602 CCDC88CQ9P219 2028 aa23.25■■□□□ 1.31
SNX5-219ENST00000606602 A0A0J9YVX5 310 aa23.25■■□□□ 1.31
SNX5-219ENST00000606602 NRP2O60462 931 aa23.25■■□□□ 1.31
SNX5-219ENST00000606602 SNRNP200O75643 2136 aaKnown RBP23.25■■□□□ 1.31
SNX5-219ENST00000606602 VAPBO95292 243 aa23.25■■□□□ 1.31
SNX5-219ENST00000606602 EIF2S1P05198 315 aaKnown RBP23.25■■□□□ 1.31
SNX5-219ENST00000606602 MGAT1P26572 445 aa23.25■■□□□ 1.31
SNX5-219ENST00000606602 FMO4P31512 558 aa23.25■■□□□ 1.31
SNX5-219ENST00000606602 MRNIPQ6NTE8 343 aa23.25■■□□□ 1.31
SNX5-219ENST00000606602 DRICH1Q6PGQ1 229 aaPredicted RBP23.25■■□□□ 1.31
SNX5-219ENST00000606602 MAMDC2Q7Z304 686 aaPredicted RBP23.25■■□□□ 1.31
SNX5-219ENST00000606602 DNAJB14Q8TBM8 379 aa23.25■■□□□ 1.31
SNX5-219ENST00000606602 PPP4R1Q8TF05 950 aa23.25■■□□□ 1.31
SNX5-219ENST00000606602 BARD1Q99728 777 aaKnown RBP23.25■■□□□ 1.31
SNX5-219ENST00000606602 CRB3Q9BUF7 120 aa23.25■■□□□ 1.31
SNX5-219ENST00000606602 LHPPQ9H008 270 aa23.25■■□□□ 1.31
SNX5-219ENST00000606602 ZNF304Q9HCX3 659 aa23.25■■□□□ 1.31
SNX5-219ENST00000606602 NOVA2Q9UNW9 492 aaKnown RBP23.25■■□□□ 1.31
SNX5-219ENST00000606602 LOC105369274A0A096LPK9 316 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 LOC102723532A0A0G2JNH3 316 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 A0A1W2PPV9 198 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 WIPF3A6NGB9 483 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 VSTM2BA6NLU5 285 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 MED26O95402 600 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 LDLRP01130 860 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 ARNTP27540 789 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 OR4N4Q8N0Y3 316 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 OR11G2Q8NGC1 345 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 FAM136AQ96C01 138 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 MFSD3Q96ES6 412 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 THOC3Q96J01 351 aaKnown RBP23.24■■□□□ 1.31
SNX5-219ENST00000606602 C5orf34Q96MH7 638 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 BIRC8Q96P09 236 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 KIFC1Q9BW19 673 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 SYBUQ9NX95 663 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 SPATA7Q9P0W8 599 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 NOTCH2Q04721 2471 aa23.24■■□□□ 1.31
SNX5-219ENST00000606602 GOLGA8KD6RF30 607 aa23.23■■□□□ 1.31
SNX5-219ENST00000606602 GOLGA8TH3BQL2 631 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms